| New model in OGS2.0 | DPOGS206949 |
|---|---|
| Genomic Position | scaffold18:- 166106-187408 |
| See gene structure | |
| CDS Length | 2391 |
| Paired RNAseq reads | 953 |
| Single RNAseq reads | 3086 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012955 (2e-73) |
| Best Drosophila hit | CG11448 (3e-49) |
| Best Human hit | RILP-like protein 1 (2e-26) |
| Best NR hit (blastp) | PREDICTED: similar to GA11009-PA [Tribolium castaneum] (8e-81) |
| Best NR hit (blastx) | PREDICTED: similar to GA11009-PA [Tribolium castaneum] (4e-76) |
| GeneOntology terms | GO:0008150 biological_process GO:0005575 cellular_component GO:0003674 molecular_function |
| InterPro families | IPR019143 JNK/Rab-associated protein-1, N-terminal IPR021563 Rab interacting lysosomal protein |
| Orthology group | MCL12792 |
Nucleotide sequence:
ATGCCAGATTACGATATGGAAGTGACCGTTGTAGATGTTTATGATATGGCTTCGGACATT
GGAAAGGAATGTGAAATAATTATCGAAAAATACGGCCCTGAAGCTGTAACAGCTCTACTA
CCGAAGGTGATAAATGCGCTGGAATTATTAGAAAATTTGGCTGTACGCAATGAAAAGGAG
AATCAAGCATTGAACGAATTAACAGCGAAGATATCGCAGTTAGAAAACGATAAAATAGAA
AAGGCGGAGTACAGACAACGATTCGAAAAGGAGATAGAGGCTATCGAGGAGCAGTGGAGG
ACGGAATCAGCTGAGTTGGTCACAGCCGTCGCCAGGCTCCAGGACGAGAATAAACGTTTG
AGACGTACCATCAACTCGCCAGCGGACGGGACCAGCGCCCCGCCGTCCCCGGCCAGGGAG
CACGATCAGGAGGTGCTGTCCCGTCTGAGCAGCACCGCGGAGAAGCAGCGGGCGACGCTC
AGACACCAGGAGCTCCAGCTGCAGGAGAAGCAGCAGCTCATTGACAGCTTGACAAACCAA
GTGGAGAAATTGGCACAGGTCAGTCGTGATCTTCGACGGAAACACAAGCAGCTTCAAAAT
CAGATGCGTTTAGTGTGCGAGGAGAGAACCGAGCTCACGGCCATTGTTCAATCACAACAG
AGAGACATCACCGCGCTACAGAAATCAGATGCAAAAAATAAGTGCACGTCATGCAGCGTG
GCTATGGAAGACGACGAGGATCAATCCTCTAAACCGACGTTCAGCGTTCGTGAGCTGAGA
GCCATCCTTCATGAGAGGAACGAGCTCAAACTGAAGCTGAACCGGGCTGAGGAACAGTTG
CAAGCCCTGCAGGCCGAGCCACAACCTGATAGCAGCGGCTCGGACACATCCCCCAGTATA
AGTACGACGGCAGTTGATGACGAGGCACCGGTGCAAGGACCGCTGCCGGCTGAGCCGGAC
GACGCGCCCTGGAAGAGGAACAGTGGAATAAGGAAGTTGAAGAGTTGTCGGTCCGCAGTT
TTCGCAAGCTCTTTGCTGAGTCTGATATCGCCGTGGGGGGGTTCTCGCGTCGTCAGCTGG
GTCGCTCCGGCGCCGCCGCGGCCGCCACCGCCCCCGCGTAGACACTCCGACCCCATACAC
CACACACACACCCAACAGCTACACCAGCCCCTCCAGACCCAGTGTCCATACGCCACCAAC
CGTCCGCGCGATCTCCGGTATGAGCTGCTACAACTGGCGCTAGGGAATAACGAAGTCTAC
ACGTGGTTAGGCACCAACGACACTAAGGACTACGAAATAGACTTCAGATTCGAACACGAC
GTACCGCTACAGAGGTCCATCTCGCTGGATCGCGGCGTCGATATATTCAATTACCTTCAG
ACGCTGTCTGATACTGGGCTGTCGGATTCGTATTGGTCGCTGGATTCGGAAGTGGGGGCG
AGCCTGCGTTTGGAACAATACAGGAGCTTCGAGGATGTCCAGGCTCCTCCAGTGAGGATG
AGGAGCCGGCATGTTTCGTTGGATATCACCAATTCCTTTGGAAATGTAACGCCGCTCGTG
CTGAAGGGTACTTATAAAGGCATCGAGGAAGAAAGTGGGATGTTGACACCTCAGATAAGG
AAGCTCCAAAAAACCTACTCCTTTAAGAACTTCGATGACTACAAGGATGAAAAGAATGAA
GAAGATAATTCTGATAGAGTTGAAACGGACTACAAGGGTGGTATAGAGTTCAGGGCGCCT
GTTTATAGAAGCAACAATTGTGAGAAAGAGAAAGAAGATGAAAGAATTACGCGTCAAAGA
AGAATCGGCGTCACTCAAAGCCCATGGCAGGATAACCCGATACAGAACTTGAGGAAAGAA
GTCCTGAAATATAAGTTAACCCATTTCAAAAGTTGCGATGACCTCTATAGTAGCAAAGCT
CGAACGACATCGACAGAGGCTATTAATGATATACCTTTCAATAGTTTAAAGAGCAATTAT
AAAATTAAATATAAAAGCGGCGACGGGTTGTCTGAAATAAGGAAACTGAAAAGGAATGTG
TCTTTCCGCGTAGATTTGAATCAAGAGTTCAGTCTGCCTAATGTTATATTAAATAATGAC
AGCGACGATAGTGTTGCTAGCATACAAGATACTCCCGGTACATTAGTTAGTAGAACTTGT
GATTGTAGTATCTGTGGCGAAGACGAGGTTAAAGTCGAGAATTCATTGCTGAGCAAAAAT
TTACGTAAGATATTCATGAAGTTGGTCTCATACGTACATTACGGTAAAAGATTTTCATGT
TTCGATGACAACGAAAGCGAAATGTATATCTGCGTTGTAAATGTATTGAAATTTTTGCTC
GGCTTATGGTTGAGGCATTTGGATCATAAACAACATAACCTGTGTGGGTAG
Protein sequence:
MPDYDMEVTVVDVYDMASDIGKECEIIIEKYGPEAVTALLPKVINALELLENLAVRNEKE
NQALNELTAKISQLENDKIEKAEYRQRFEKEIEAIEEQWRTESAELVTAVARLQDENKRL
RRTINSPADGTSAPPSPAREHDQEVLSRLSSTAEKQRATLRHQELQLQEKQQLIDSLTNQ
VEKLAQVSRDLRRKHKQLQNQMRLVCEERTELTAIVQSQQRDITALQKSDAKNKCTSCSV
AMEDDEDQSSKPTFSVRELRAILHERNELKLKLNRAEEQLQALQAEPQPDSSGSDTSPSI
STTAVDDEAPVQGPLPAEPDDAPWKRNSGIRKLKSCRSAVFASSLLSLISPWGGSRVVSW
VAPAPPRPPPPPRRHSDPIHHTHTQQLHQPLQTQCPYATNRPRDLRYELLQLALGNNEVY
TWLGTNDTKDYEIDFRFEHDVPLQRSISLDRGVDIFNYLQTLSDTGLSDSYWSLDSEVGA
SLRLEQYRSFEDVQAPPVRMRSRHVSLDITNSFGNVTPLVLKGTYKGIEEESGMLTPQIR
KLQKTYSFKNFDDYKDEKNEEDNSDRVETDYKGGIEFRAPVYRSNNCEKEKEDERITRQR
RIGVTQSPWQDNPIQNLRKEVLKYKLTHFKSCDDLYSSKARTTSTEAINDIPFNSLKSNY
KIKYKSGDGLSEIRKLKRNVSFRVDLNQEFSLPNVILNNDSDDSVASIQDTPGTLVSRTC
DCSICGEDEVKVENSLLSKNLRKIFMKLVSYVHYGKRFSCFDDNESEMYICVVNVLKFLL
GLWLRHLDHKQHNLCG