| New model in OGS2.0 | DPOGS206952 |
|---|---|
| Genomic Position | scaffold18:- 65025-70100 |
| See gene structure | |
| CDS Length | 1479 |
| Paired RNAseq reads | 1202 |
| Single RNAseq reads | 2729 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002878 (5e-08) |
| Best Drosophila hit | sina homologue (5e-08) |
| Best Human hit | E3 ubiquitin-protein ligase SIAH1 isoform b (4e-08) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC006740 [Tribolium castaneum] (8e-16) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC006740 [Tribolium castaneum] (4e-15) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR013010 Zinc finger, SIAH-type IPR008974 TRAF-like IPR013323 Seven In Absentia Homolog-type IPR004162 Seven-in-absentia protein, sina IPR018121 Seven-in-absentia protein, TRAF-like domain |
| Orthology group | MCL18591 |
Nucleotide sequence:
ATGGGAGAAAAGAATTCAAAAATTGAGTGTAACAAAGAAAATTTAAGTAACAGGAATCAA
GAGAGCGGGAGGCAAAGTCATTGTACAGCAGAAGACGTCGTAAAAATTTTAGAAACTCAA
AAACGGTTATATAACGAGAGACTATTGGCAGAACAAAGCAGAATATACCCCAATATACAA
TCAGAATTGACTTATTCACCAAGTACTTCAAATAGTTACAATATAACACCGACCGCTCCT
GCAGAGATCCTTTTATATACAACTGATACCCAAACATCGGGAGCTGCTAGCCAAATTATC
CCATTGCGTGAACAGCAACCTACTCAGAGACATGAATATCCAACTTCGGGCCCTTCAACA
TCCACTTTGGATTCACAAGAATCAAATAAACAAAGACACAATAGCAGACCAAATCAAAGA
GCTGCGAGTTCCTTGCGACAATATGAATATCCAACTTCGGGCCCTTCAACATCCACTTTG
GTTTCCCAAGAATCAAATAAACAAAGACGCAATAGCAGACCAAATCAAAGAGCTGCGAGT
TCCTTGCAACAACATGAATATCCAACTCCGGGCCCTTCAACATCCACTTTGGTTTCCCAA
GAATCAAATAAACAAAGACGCAATAGCAGACCAAATCAAAGAGCTGCGAGTTCCTTGCAA
CAGACAAATAGAAGAGCAATTGTTAATTGTGTTACTTGCAAGGAAAAGTTTGGTTTAAAT
ATTTATCAGTGTCAAAATGGGCACAGCTCTTGCGAAGACTGCAAATCCAAAATGAAAAAT
TGCGGTACATGTTGTGAAATTATCACAAATATGAGAAACATCACACTCGAGGCAACTTTT
GCCTCTAACATTGTAGATGACAAGCCAAAAAAGCCGTGTATATATAAGAGTCGTGGTTGC
ATATTGCATTTTCAAATGGATGATATGGAGGCTCATCTGACTGATTGTATATTCAGGGAT
CTACCCTGCCCTTTGACTAATTTAAATGATGCCTGTAACTGGAAAGGATGGATGAAGAAT
ATTTTGGAACACCTCCATGACATGCATCCAGAAAAGTGTCAGGCTGAAGTTAACAAAGAA
ATGTCATTGCTGCTAAGCGGCTTGGATTACAAAGGTTTTCATTTAATCACCCTTGGAAAT
ATCCCCTTTATACTACATATACAAATTGACATAACACTAAACAACATTTCCATGGCTGTA
CTGTGTCTCGGTACAAAAATGCAAGCTTCCAAATGGATCTATGAATTGCATGTATACCAA
AAGAAAACTCCTCGTCGCAAATTCGAATACATCGACATTTGTCAGCCGTACGGGACACCA
ATCTGCGATATAATTACAGCCTGTAATTGTGCCATCATCAATATAGATTATGCAAAAACC
TTCCTGGATGCTGGCAAGTTGACTTATAAGCTCAATTATCTAGTTCTACGGGGTGACGAG
TATGCGATATCTGTTAGAGACTCGATGGGCCCTAATTGA
Protein sequence:
MGEKNSKIECNKENLSNRNQESGRQSHCTAEDVVKILETQKRLYNERLLAEQSRIYPNIQ
SELTYSPSTSNSYNITPTAPAEILLYTTDTQTSGAASQIIPLREQQPTQRHEYPTSGPST
STLDSQESNKQRHNSRPNQRAASSLRQYEYPTSGPSTSTLVSQESNKQRRNSRPNQRAAS
SLQQHEYPTPGPSTSTLVSQESNKQRRNSRPNQRAASSLQQTNRRAIVNCVTCKEKFGLN
IYQCQNGHSSCEDCKSKMKNCGTCCEIITNMRNITLEATFASNIVDDKPKKPCIYKSRGC
ILHFQMDDMEAHLTDCIFRDLPCPLTNLNDACNWKGWMKNILEHLHDMHPEKCQAEVNKE
MSLLLSGLDYKGFHLITLGNIPFILHIQIDITLNNISMAVLCLGTKMQASKWIYELHVYQ
KKTPRRKFEYIDICQPYGTPICDIITACNCAIINIDYAKTFLDAGKLTYKLNYLVLRGDE
YAISVRDSMGPN