New model in OGS2.0 | DPOGS206966  |
---|---|
Genomic Position | scaffold18:+ 11245-14125 |
See gene structure | |
CDS Length | 975 |
Paired RNAseq reads   | 157 |
Single RNAseq reads   | 589 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013014 (3e-132) |
Best Drosophila hit   | CG2663, isoform A (1e-08) |
Best Human hit | ND |
Best NR hit (blastp)   | AGAP002559-PA [Anopheles gambiae str. PEST] (5e-15) |
Best NR hit (blastx)   | PREDICTED: similar to CRAL/TRIO domain-containing protein [Acyrthosiphon pisum] (2e-13) |
GeneOntology terms    | GO:0008431 vitamin E binding GO:0005215 transporter activity GO:0005622 intracellular GO:0006810 transport |
InterPro families   | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal |
Orthology group | MCL40803 |
Nucleotide sequence:
ATGTCACCAGCAGCTTCGTTTGGAGTACGATGGGCTCGTGATAACTTGACAAGAGAGGCA
ACTGAAGACGAAATTCAAGCTTTGAACATATTTCCTGTGACCTGCGATGGAGACGAGGTT
GAAGCTTCCAAACGAGCTCGAAGATACTACACAGCCAGAGGCCCGGGAGGCCTAACAGAG
CTCTGGCATAAAAGACATCCCGATGATGATGAAATCCTCTCTAGCTGCCAAGACACTTAT
ATAGTACCTCTTCGAGCGAGAAGCAGAGGAGGCAGCCGGATGACACTTATTCGTCTTCCG
GCTCCCGCTATAAATCGAACTCTATCAGCTAAAGCCTTGCTGGCGAGGTGGCTTATGATA
TTAGATATCAGATTACAAGAAGATCCAACCCCCGGGGACGAAGTGGTATTCATTGACGTC
ACTGACCTACAACCCTCGCATCTTAAGAACCACTTCAGAGGATCCCATTGGAGAGATTTT
ATCTGGTGTATAAGGTCCGCTTACCCCCGAAAGTTCTCAGCGATTCACATAATAAATACG
CAACGCTTAAAGACAATGTCGCTACTCCTACTTCATATGGGGTTGTACCCATGGCGGCGC
AAGATATTCCATACTCACGCTGATCCTGAGCAAATTAAGCGCGCCATGGGTTTTGACTGT
TTCCCCCAGGAAGGACTTCCGTATGAGTACGGAGGGAAGGCTGGGGCTATGAAAGATCTG
AACGACGAATGGACTAAAAAACTCCTGCTCAATTCAAAATGGCTGCAAATGGAAGAACGG
AAATATTACGAAACGGAATTGAAACCGCCGATAAAACGTGATAAGAGATCAGTGCGGAGG
CTGCGAGCTAGTATCTCGTATGACATTCTTACACGAACACATTCATGCAGGTCTCTAAAA
TGTGATGAATATGACGAAGGGCTGCAGGGCGCGTACAGGACACTCAAAGTTTCCGACCGT
GATTATTATGTATGA
Protein sequence:
MSPAASFGVRWARDNLTREATEDEIQALNIFPVTCDGDEVEASKRARRYYTARGPGGLTE
LWHKRHPDDDEILSSCQDTYIVPLRARSRGGSRMTLIRLPAPAINRTLSAKALLARWLMI
LDIRLQEDPTPGDEVVFIDVTDLQPSHLKNHFRGSHWRDFIWCIRSAYPRKFSAIHIINT
QRLKTMSLLLLHMGLYPWRRKIFHTHADPEQIKRAMGFDCFPQEGLPYEYGGKAGAMKDL
NDEWTKKLLLNSKWLQMEERKYYETELKPPIKRDKRSVRRLRASISYDILTRTHSCRSLK
CDEYDEGLQGAYRTLKVSDRDYYV