DPGLEAN09272 in OGS1.0

New model in OGS2.0DPOGS206976 
Genomic Positionscaffold18:+ 189277-212496
See gene structure
CDS Length1683
Paired RNAseq reads  89
Single RNAseq reads  209
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA012877 (1e-170)
Best Drosophila hit  rabphilin, isoform A (9e-69)
Best Human hitdouble C2-like domain-containing protein beta (2e-50)
Best NR hit (blastp)  PREDICTED: similar to Rabphilin CG11556-PA [Tribolium castaneum] (9e-108)
Best NR hit (blastx)  PREDICTED: similar to Rabphilin CG11556-PA [Tribolium castaneum] (1e-113)
GeneOntology terms








  
GO:0048488 synaptic vesicle endocytosis
GO:0008565 protein transporter activity
GO:0008021 synaptic vesicle
GO:0016192 vesicle-mediated transport
GO:0007269 neurotransmitter secretion
GO:0016079 synaptic vesicle exocytosis
GO:0017137 Rab GTPase binding
GO:0006886 intracellular protein transport
GO:0008270 zinc ion binding
GO:0016020 membrane
InterPro families







  
IPR018029 C2 membrane targeting protein
IPR010911 Rab-binding domain
IPR008973 C2 calcium/lipid-binding domain, CaLB
IPR011011 Zinc finger, FYVE/PHD-type
IPR020477 C2 region
IPR001565 Synaptotagmin
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR000008 C2 calcium-dependent membrane targeting
IPR003315 Rabphilin-3A effector, zinc-binding
Orthology groupMCL15143

Nucleotide sequence:

ATGAACTTACAAAATAAAGCTAATAAGTATGTGTGTCCCAACGATCGACAACTTTCCTTA
CGCGCAAAACTGCGAACCGGTTGGAGCGCTGCCCGCAGTGAACCCCCGCTGACGGCAACC
GAACGGGAAGCTATTGCGGAGGTTGTACGACGAGCTGAGAAAGTCGATGAGGTCGAAGCC
CGACGAATCGGCCGACTGGTTGCCCGACTTGAAGGTATGCGTAGATCAGCTCAAGGGCCG
GCGCCAAGAAGTTGTCTGCTCTGCGGCGAAACCGCTAAGCTCCTGTCTCCGCTGCGAAGA
TGCTCCATGTGCCAACATTGGGCCTGCTCTAAATGTGTCATAGAAACACCATCACAGCAC
AGGCCGTCTATATATTCAAGAGATCCGTACATGTGCAACCTTTGTGCTGAAACAAGAGAG
ATGTGGAAAAAATCCGGAGCATGGTTCTTTAAGTCATTACCAAAATATGTCCTGCCATCT
AAGAAACCAACCGGGCGGTACAACGACTCTGATATTGCTAAAACACTTCAGGAACCAGGT
ACGAGCAGTAATGATTGTAAGACAGACTCCGATCCTGGTACCCTACACTGTATGCCTCCG
CCTTCATTCTCAAGACAACCTAGCAACACTGACAGCAGAAAATCGGTCAGCTCAACACAG
GATATCGAATGGAGCGAAACTGACATCCTTAGCCACGGTGTCAGCGGCATCAGTCTCCAA
CGAGCTGACAGCATCAATCAAAGACCGCTGTGTCTCAAACGCACTAGCAGCAAAGGCAGC
GCCTACAGTCTCAGAAACATAAGAAAGGACATGTCTAAACCGATCACGCAAGTCGAAAGA
CCTCCGACGATTCCCGACGCTGGTTTCGGTACCATAGAAATTAAACTCTCTTATGACAAC
GGAACCTCTTCATTGGCCGTAACAGTGTTAAGGGCTAGGGGCTTGATCGGTATGGACATG
ACGGGTCTGTCTGACCCCTTCTGTAGATTGGAAGTATTGCCACGGGAAGGTGCATACTTT
AATCGTTTGAGGACAAAAACTGTTCACAAGACAAAGAATCCTGAATACAACGAGACACTA
CATTTCTTCGGCATCACTGAATCGGATTTATCTATAAAGTCGCTTGAATTGGTTGTGTTC
GACGACGATCGATACGGCTGCGATGAAATGGGTTCAGCGACAGTTGCTTTACGCGAATGC
CTAAAGACCCCGGCTCAGCTGCGTCTCGCACTCTCCGGGTCCTCAGGCTGCGAGCCGATA
GGACCGAGACTCCTGCTAGCATTATGTTACAGTACCAAGAAACGGGCACTGGTGGTCACC
GTGTGTAGAGGAACCGACCTCCCACCACAAGATAGCAACGGATACTCAGATCCATTCGTT
AAACTACATCTCGACCCGGACCCGTATCACAAAAAACATAAGACGTCTATTAAATGGCGA
AACCTAAATCCTGTTTGGAACGAAGAATTTTATTTCGAGACACGTCCGACGGAGCTTTCC
CGCCAAAATTTGACTTTGACAGTTTGGGACAAAGACTACGGCAAACCGAATGACTTTCTT
GGTAGCTTGGTGCTCGGCGCGAGCAGCAAAGGTAGAAGACTGAAACATTGGATGGACTGC
ATTAAATTCCCGGATCACCGTCACGAACAATGGCACTCGTTAACTGATATTCAACACTTG
TAA

Protein sequence:

MNLQNKANKYVCPNDRQLSLRAKLRTGWSAARSEPPLTATEREAIAEVVRRAEKVDEVEA
RRIGRLVARLEGMRRSAQGPAPRSCLLCGETAKLLSPLRRCSMCQHWACSKCVIETPSQH
RPSIYSRDPYMCNLCAETREMWKKSGAWFFKSLPKYVLPSKKPTGRYNDSDIAKTLQEPG
TSSNDCKTDSDPGTLHCMPPPSFSRQPSNTDSRKSVSSTQDIEWSETDILSHGVSGISLQ
RADSINQRPLCLKRTSSKGSAYSLRNIRKDMSKPITQVERPPTIPDAGFGTIEIKLSYDN
GTSSLAVTVLRARGLIGMDMTGLSDPFCRLEVLPREGAYFNRLRTKTVHKTKNPEYNETL
HFFGITESDLSIKSLELVVFDDDRYGCDEMGSATVALRECLKTPAQLRLALSGSSGCEPI
GPRLLLALCYSTKKRALVVTVCRGTDLPPQDSNGYSDPFVKLHLDPDPYHKKHKTSIKWR
NLNPVWNEEFYFETRPTELSRQNLTLTVWDKDYGKPNDFLGSLVLGASSKGRRLKHWMDC
IKFPDHRHEQWHSLTDIQHL