| New model in OGS2.0 | DPOGS206978 |
|---|---|
| Genomic Position | scaffold18:+ 231820-235503 |
| See gene structure | |
| CDS Length | 1515 |
| Paired RNAseq reads | 221 |
| Single RNAseq reads | 623 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009947 (3e-93) |
| Best Drosophila hit | CG10722, isoform A (9e-36) |
| Best Human hit | chromosome 1 open reading frame 14 (3e-10) |
| Best NR hit (blastp) | PREDICTED: similar to LD13710p [Nasonia vitripennis] (4e-44) |
| Best NR hit (blastx) | PREDICTED: similar to LD13710p [Nasonia vitripennis] (1e-45) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR011050 Pectin lyase fold/virulence factor IPR012334 Pectin lyase fold |
| Orthology group | MCL15573 |
Nucleotide sequence:
ATGGTTGCTGTGTTTACGTTCACGAGAAGCGACAACGATATTCTTCAGGAATTACTGCGT
GTGTTCAGTTCTGGGCGTTGCACAGCTAGAGAGCAATGGAGTATGCAGGCCGAACTATTA
GTAGAGCCTGTTGGATGGGATGCTCTGTGGAAATTGTCAAAGGATTTCTGTAAAAAATTT
GAAGTGAGATATCCCTGTGTTGCATACATCACAGTAATGTCAGTGAACTTTGAAGATCTA
TCTGCCAATGTGGATGTGCTGAGGGTTCAGCATGAGGCTGTGTCTCTACCAGAAAGTATT
GTTAGTGTGCCATTGATAGAATTGTGGCCAACAATTAAACAGAGGGAGCAGTGCGTTAAT
GCAGCGAGCACAGCCGAGTTTATAGATCTTATGAGATTCTTTTACGATAACATATGGATG
CCATGGGACGATCAGGATGATAAAGTCCTTCTACCAAACACCATAGAGGATCGTATGAAT
CTGTGGATGGAGTTGCACAATGGCACCATACCAAACTACATTGCGAGATCTATCACCTTG
CTGAGAACTAGTGCTATCAATGCTCATCAGAAGTTACAGGAACTCGATTCATCTCTATGC
GAAGGAGATTTTGCTGACGATGATGATTCCCTGTTACCACCAAACTACATATCGCTCTGT
GCTGAATTAAATGCGAGATTAGACGGGCTGATGTCAAAATGGACATTATATGAAAATCCT
CTCATCAGGGAGCAATATTTGGTTAAAACTATGAAAAAGTATCAAAGGAATAAGAGCAAA
AAGAATGTGATAGCTCTGTGGCAGGGAGGTGATATAGCGGAATTCAAGAATATCACCAAA
TTTCTAGAAACGAGAGTCACGTATGATCACACACTGACTATAACAATGTCAGCTGAAGAA
GCATTATCATTAGAACCAAACGAAGTAGTTGTGTGCAGCAAACAGTATGAGATACCTGAA
ATATCATTGTCGCAAATAACTTTGTGTAGTATAGGCGGAGCTACTTTAAAGGCATCAGAT
ATGAGATCATGTTTATTAATGTTGAGTGATGTATGCCAGATACAAGACATGACGCTACAC
TGTTCTTCTGTTAATACGGTCATAGTAATGCTTTCTGGTACGCTACATGTCAAAAATTGT
ATGCTTCTAGACGATTCAAGTAATTTCCAGAGTGATTTTGCTCAAGGTATTGTGGCAATG
TCTGGTGCGAAAGTTATATTAGAAGATTGTACATTTGAAAATTTCTACTCTGGTATTGTA
ATTCATAAAGGAGCTCAGATGGAACTTCGAAATTGTTTAATAAAGAAGTGCGGTGTTGGC
ATACAAATGTATTCCGGGGCTCAGGTTAAGTTGGACGGTGTCATAGTTGAGGAATGTACA
GAACAGTGCATACGATGTGAAATGGAGAATGGAATTGTTAAGACTGAAATGGATGGCCTC
GAAATGATAAATTGCAAGATTGGTTCCGGTGATCTACAGAAAGAAATCTATGTTACACAA
GATGTCAATATGTAA
Protein sequence:
MVAVFTFTRSDNDILQELLRVFSSGRCTAREQWSMQAELLVEPVGWDALWKLSKDFCKKF
EVRYPCVAYITVMSVNFEDLSANVDVLRVQHEAVSLPESIVSVPLIELWPTIKQREQCVN
AASTAEFIDLMRFFYDNIWMPWDDQDDKVLLPNTIEDRMNLWMELHNGTIPNYIARSITL
LRTSAINAHQKLQELDSSLCEGDFADDDDSLLPPNYISLCAELNARLDGLMSKWTLYENP
LIREQYLVKTMKKYQRNKSKKNVIALWQGGDIAEFKNITKFLETRVTYDHTLTITMSAEE
ALSLEPNEVVVCSKQYEIPEISLSQITLCSIGGATLKASDMRSCLLMLSDVCQIQDMTLH
CSSVNTVIVMLSGTLHVKNCMLLDDSSNFQSDFAQGIVAMSGAKVILEDCTFENFYSGIV
IHKGAQMELRNCLIKKCGVGIQMYSGAQVKLDGVIVEECTEQCIRCEMENGIVKTEMDGL
EMINCKIGSGDLQKEIYVTQDVNM