| New model in OGS2.0 | DPOGS213934 |
|---|---|
| Genomic Position | scaffold330:- 92929-97196 |
| See gene structure | |
| CDS Length | 1053 |
| Paired RNAseq reads | 334 |
| Single RNAseq reads | 789 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003377 (2e-164) |
| Best Drosophila hit | CG8142 (3e-103) |
| Best Human hit | replication factor C subunit 4 (2e-87) |
| Best NR hit (blastp) | replication factor C4 [Bombyx mori] (2e-179) |
| Best NR hit (blastx) | replication factor C4 [Bombyx mori] (3e-164) |
| GeneOntology terms | GO:0003677 DNA binding GO:0006260 DNA replication GO:0005663 DNA replication factor C complex GO:0005524 ATP binding GO:0003689 DNA clamp loader activity GO:0031122 cytoplasmic microtubule organization GO:0005875 microtubule associated complex |
| InterPro families | IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal IPR003959 ATPase, AAA-type, core IPR013748 Replication factor C IPR003593 ATPase, AAA+ type, core |
| Orthology group | MCL15793 |
Nucleotide sequence:
ATGCAGGCATTTTTAAAAACCGGCAAGATATCAAGTACTGATAAACCATCTACTTCGGGA
GTTAAATCCACAAAGAAAAAGGCTCCAGCTCCATGGGTTGAAAAATACCGTCCAAAAACT
ATAGATGATATCGTTGATCAAGGAGAAGTGGTTCAAGTTTTAAGAGAATGTCTGGCTGGA
GGTGATTTACCACATCTGTTGTTTTATGGTCCACCAGGAACTGGTAAAACAAGTGCTATC
TTGGCTGCTGCTAGACAGCTCTTTGGAGACATTACTAGAGAGCGAGTTCTTGAACTGAAT
GCTTCAGATGAAAGAGGAATACAAGTCATAAGAGATAAAGTAAAAACTTTTGCCCAGTTA
ACAGTCAGCAATACAAGACCAGATGGCAGACCGTGCCCGCCATACAAACTGGTTATCTTG
GACGAAGCAGATTCAATGACAACGGCAGCGCAGGCAGCCTTACGTCGAACTATGGAGCGA
GAGACGAGGACTACACGTTTTTGTCTCATATGTAATTATGTATCAAGAATCATTCCACCA
ATTACCAGCAGATGTTCGAAGTTTCGATTCAAACCGCTGGCGAGGGAGAATGTTATCAAG
AGATTACAAGAAGTATGTAAATCAGAGGCTGTGGAGGTTGGTGATGGTGAAGTACTCCAT
CAAGCTGTGGACACATGTGGGGGAGATCTTAGGCGAGCACTCACAGCACTGCAGTGCTGT
CAGCGCTTACTCGGCAAAATTACAGCTGATGGATTAATTGAGGTGACGGGACTCGTACCT
GAAAATCTAGTGGATGAATTTCTAAACGTGAAAAACTACAATGAGTTGGAGAGATTCGTT
GAGAATTTTCTCATGGACGCGTATTCAGCATCTCAATTATTGGAACAGCTGTCAGAGAGA
GTGGTGAATGCTGGTCATTTGACTAACAAGCAGAAGTGTGTGATTAGTGAGAAGCTGGCT
GTGTGTTCTCACCGACTACTAGAGGGTGGAGCTGAGGTGATGCAGCTGACAGACCTCGGC
TGTACCGTGATCATGGCTAATAATAACCCGTGA
Protein sequence:
MQAFLKTGKISSTDKPSTSGVKSTKKKAPAPWVEKYRPKTIDDIVDQGEVVQVLRECLAG
GDLPHLLFYGPPGTGKTSAILAAARQLFGDITRERVLELNASDERGIQVIRDKVKTFAQL
TVSNTRPDGRPCPPYKLVILDEADSMTTAAQAALRRTMERETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLARENVIKRLQEVCKSEAVEVGDGEVLHQAVDTCGGDLRRALTALQCC
QRLLGKITADGLIEVTGLVPENLVDEFLNVKNYNELERFVENFLMDAYSASQLLEQLSER
VVNAGHLTNKQKCVISEKLAVCSHRLLEGGAEVMQLTDLGCTVIMANNNP