| New model in OGS2.0 | DPOGS207356 |
|---|---|
| Genomic Position | scaffold1618:- 30360-36096 |
| See gene structure | |
| CDS Length | 1959 |
| Paired RNAseq reads | 1375 |
| Single RNAseq reads | 3237 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010281 (2e-49) |
| Best Drosophila hit | CG14607 (2e-35) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to Collagen alpha-1(V) chain [Acyrthosiphon pisum] (1e-49) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (3e-65) |
| GeneOntology terms | GO:0005576 extracellular region GO:0008061 chitin binding GO:0006030 chitin metabolic process |
| InterPro families | IPR002557 Chitin binding domain |
| Orthology group | MCL20152 |
Nucleotide sequence:
ATGATGTGCCTGCATCGTGGTAATCGCTCCGTCCATAAACCACGTACAGATTTGACCCGG
TTATTTTGTTATCTCAGATATATTTCGACGGTTACATCCCTCGAAGGTGGTGGTGGATTT
GAACATAAAAGCACGCAACAAGCTAGCTTAGTACAGTGTGCCTCCGATAGCACTACACAC
ACGAACGTAAAAATATTCAGCACCAACATGCTACGTTTGTCGACGTTTTGCATGTTACTC
GCCCTTGCGATTGCTCAAAGTGGCTATGAGTACAATAAACCAGGCAGGCCGTTTGGGACA
ACTACACCATCTAGCAGACCAGGCTACAAGCCTGGGCAGACGGCTGCGTATCCCGGTTCG
TCCTACCCAACAACTTCCCAAAACGGAGAGTATACACCTAGTAGCTTAGGAACTACTCCG
AATTACCCAGGATTTAATCGGCCTCAGACTGGCTATCCTGGGCAAACACCGGGTGGTCCT
ACCGGCCCTATAGCTGGTCCAGGAGGAAATTATCCAGATCAAGGTGGGAAGTATCCCGGC
AAGGGTGGTAGCTACCCAGGCCAAGGTGGTAATTACCCCGGGCAAGGTAGCAACTACCCT
GGACAAGGTGGTAACTATCCTGGGCAGGGTGGAAACTTACCAGGACAAGGTGGCAACTAC
CCTGGACAAGGAAGCAACTACCCTGGACAAGGTGGTAACTATCCTGGGCAGGGTGGAAAC
TTACCAGGACAAGGTGGCAACTACCCTGGACAAGGAAGCAACTACCCTGGACAAGGTGGT
AACTATCCTGGGCAGGGTGGAAACTTACCAGGACAAGGTGGCAACTACCCTGGACAAGGA
AGCAACTACCCTGGACAAGGTGGTAACTATCCTGGGCAGGGTGGAAACTTACCAGGACAA
GGTGGCAACTACCCTGGACAAGCAAGCAACTACCCTGGCCAAGGAAGCAATTACCCTGCA
CAAGGACAAACGCCAGAACGTCCAGGTTTTGGTCCAGGAGGTCCTGGTTTTGATAACTCT
GGTGCCTATGATAATGGTGACTATTCTGCCATTCCCGGAGAACCGGACAAGGACTACCCC
ATACTATCAACTATCCCAGAAACATCATTCAGATGCGATGCTCAGCCTTACCCTGGTTAT
TATGCTGATATAGAAACTCGCTGTCAAGTTTTTCATGTATGCGCAAATAATATTACCTAT
GACTTCCTATGCCCGAATGGTACCATTTTCTCACAAGAATACTTTGTTTGTGTCTGGTGG
AATCAATTTGACTGCAATTCAGCTCCAAGCTTCTTTGAACTTAACGCAAACTTATATGAT
TATTCAATTATTGGCTCTCAACTGCCTGGCTTCCCACAAGGACCTCAGCAACCTAATGGA
TTTCCTCAAGGACCAGTATCGTATCCTCAAGGTCCCCAGCCGTCAGGTGGCTTTCCTCAA
AAACCACTACCATCTGGTGGATATCCCCAACGACCCCAACAACCTAGTGCATACCCTCAA
GGTCCACAACAGCCTGGTACTTTTCCAAACACATTAGGGCCACAAGGACCATCTTATCCA
GGAAACGTAGGACCTTCGACGACTTATCCCGGAAGCATCGGACAAACAACAGGATTTCCA
AGTGGTCCTAATCAAGGTCCCTCAACAGGTTTTCCCGGTAGTATTAGTACCCAAGGCCCA
GGTTCTTACCCAGGTTCTTACCCAGGCTCGCAGCAGCCGAGCTCCTACCCCAGTGGATCT
AGCCCACAAAGTCCCTCTGGATATCCAGGCAGCTACACAACACCAAGTTCCAACGGTCCT
ATTTATCCAGGTACGAGGCCAGGAAGTAATCAAGGATATCCATCAGACAAACCATCTGGT
CCCAGTTTTCCCACAGGAACAACAAGACCCCAACCCTCCGGTGACGGCAGTTATCCGGCT
CAACAACCGAACAGAGAATACCTACCACCAAGAAATTAA
Protein sequence:
MMCLHRGNRSVHKPRTDLTRLFCYLRYISTVTSLEGGGGFEHKSTQQASLVQCASDSTTH
TNVKIFSTNMLRLSTFCMLLALAIAQSGYEYNKPGRPFGTTTPSSRPGYKPGQTAAYPGS
SYPTTSQNGEYTPSSLGTTPNYPGFNRPQTGYPGQTPGGPTGPIAGPGGNYPDQGGKYPG
KGGSYPGQGGNYPGQGSNYPGQGGNYPGQGGNLPGQGGNYPGQGSNYPGQGGNYPGQGGN
LPGQGGNYPGQGSNYPGQGGNYPGQGGNLPGQGGNYPGQGSNYPGQGGNYPGQGGNLPGQ
GGNYPGQASNYPGQGSNYPAQGQTPERPGFGPGGPGFDNSGAYDNGDYSAIPGEPDKDYP
ILSTIPETSFRCDAQPYPGYYADIETRCQVFHVCANNITYDFLCPNGTIFSQEYFVCVWW
NQFDCNSAPSFFELNANLYDYSIIGSQLPGFPQGPQQPNGFPQGPVSYPQGPQPSGGFPQ
KPLPSGGYPQRPQQPSAYPQGPQQPGTFPNTLGPQGPSYPGNVGPSTTYPGSIGQTTGFP
SGPNQGPSTGFPGSISTQGPGSYPGSYPGSQQPSSYPSGSSPQSPSGYPGSYTTPSSNGP
IYPGTRPGSNQGYPSDKPSGPSFPTGTTRPQPSGDGSYPAQQPNREYLPPRN