| New model in OGS2.0 | DPOGS207358 |
|---|---|
| Genomic Position | scaffold1618:- 13951-19742 |
| See gene structure | |
| CDS Length | 1998 |
| Paired RNAseq reads | 2706 |
| Single RNAseq reads | 6214 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012704 (8e-36) |
| Best Drosophila hit | CG3558, isoform A (2e-64) |
| Best Human hit | hypothetical protein LOC729830 (1e-36) |
| Best NR hit (blastp) | PREDICTED: similar to CG3558-PA, isoform A [Apis mellifera] (3e-92) |
| Best NR hit (blastx) | GJ17503 [Drosophila virilis] (2e-71) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR019384 Retinoic acid induced 16-like protein |
| Orthology group | MCL11115 |
Nucleotide sequence:
ATGTCAGCCAGCTGTCCGCCATTGGCTCATTGTCTCCTTGCTGGAAACGCGTGTCCTATA
CTTGCCACCGGTCTAAGCGGTCTCTATTCCTTACTGCCGAGGTCGCTGTGCGTCGCTCGA
CTGCTGCCAGATGACGTGAACAGAGTACACAAGCTCACATTGTTTATTGACTCGCTAGAG
TTTTGCAATGCTGTGGCTCAGGTTGCGCACCCATCAATAAAGAGACACCTATTGGATTTG
CTTTACCAAGGTTTCTTAGTGCCCGTCATGGGTCCCGCATTATTGCAGAGCGGTGCGGCG
GAACAAGCGACGGCTATGGCCTATTTGGAGCTTTTACTGAGATGCGTCACCTCTGGTGGT
CTGCTAAGGGTTATACTGCATTATTTATTCACTTACGAATACGACGGTGTCAGAGTCATG
GATGTGCTGCTCGGACGGTTAGAGGGGAATTCGCAATTGTCGTTGGTGACGCTGTCATTA
ATGGAAACTCTGATAGATCTGAACACCGAAGACGTTATGATGGAGCTCGTATATAAATAT
CTACTGAGCGGGAACCACTTGTTGGCTGCGTACAGAAGCAAGCTCACCGACCCGGAGCCT
TATAGAGAGGCTGCGGTAGCATTCCTCGGTCTTAGTCCGAATTGTTGTATGAGATCTGTA
CGTAAAACTAGGGAGTGGGTCGACGAATTGGCTATGAGCGGAAGGAGGATATTGGATTTT
AAATGTGACAGTGACAACCGCAGAGTCAACGGCGTGCACGGCGACATCGCCATGAGCAAC
CTGGTCCAGGAGGTCAACTTTGACTACGGGAATCCAAACGAGACGCTCTTCAGCAACTAC
CACGCGTATCTCTGTGATGCTAGATTCGAAATAGTATCGAGGACGGTAGCGAGCGCTAAC
TGGACGAACAGATACGACAGTGTAGTCCCTAAAAGAGAAACAAATAATAATACGAAAGTA
ACGAAAGAGATGGTCGCGGGGACGCATATGAGGGAGCAGGACAGCCTCGTCTCACTGTCG
GCCAGTGGCTACGACACCCTCAAGAACAGTGACACGTCCGAGAAGGAGGCTCACAGCCTG
AGCTCACTGAACGAAGCGGTTGAGAACAGAAGCGATAACAATGAAACGAAAGACCAGGAC
AGCTTGACCTCCATGGGTGAGAGTAGCGGCTACGACAGCTTCCTGTATAGAGTGGACGAT
CAAGACGACGAAGGGTTCTCAGAGGATTCCTTCAAGAAGAGTATAATCAGTGTGAAACAG
GAAGTTAGGGAGTACGAGGAGCCGGTGAAGAGCTGGAGGGTCAGCGCCGAAACGATTATC
GGTCCTCTCCTAGCGAGTCTTCTCCGTAAGTCAGCCAGTTTCCTAGAATCCGAGCTGGCT
GTCGCGTGTCGCGTGTCGAGTGTTCTAAGCAAGCTAGCCTATTTCCCAACACCGATACTG
TCAGCGTTGCTGCTGTGTCCCGGATTCCTGTTACAACCAAACGTGCCATCGCTGTTCCAA
ATCCTGAGTCGTTTAAAACAAGAACTGGACGAGTTGACGGCTGGTCTCGATAACGTCGGC
GAGTTGGTTGATAAGGCGCGAGTGTTTCTCATACACCGCGAGATGGCGCTGACGAGGCGG
CCGCAGAAAAATGAAGGACAGTCGAAGTCAAATCCAGCCACACAGAGAGACGAGTCACCT
TTCCGACGAGTCGAGGTCAAGAGACGGAGCATCTCGTCCAGCTTCTCCAGCATGTTCAAC
AGGAAGACGTCCTTATCACCATCACAACAAAACTCAAACAGCCTACAAAACACCAGCAAC
ATCAGCCCAGCACAGAAGCGTCCGATATTCACACAGGAGGTGTACTGGAATCAATCCATA
ACGTTGAGATCAATCCTGAACGCTGTCATACTGGACGAGTGGTTGAAGGAACTGTCGGCC
ATATGCGAGGAACACGCTCTGCGTCTTACAGCCGACGTCTACGAAAACGACACGTACATA
CGATCCGTGGCATTATGA
Protein sequence:
MSASCPPLAHCLLAGNACPILATGLSGLYSLLPRSLCVARLLPDDVNRVHKLTLFIDSLE
FCNAVAQVAHPSIKRHLLDLLYQGFLVPVMGPALLQSGAAEQATAMAYLELLLRCVTSGG
LLRVILHYLFTYEYDGVRVMDVLLGRLEGNSQLSLVTLSLMETLIDLNTEDVMMELVYKY
LLSGNHLLAAYRSKLTDPEPYREAAVAFLGLSPNCCMRSVRKTREWVDELAMSGRRILDF
KCDSDNRRVNGVHGDIAMSNLVQEVNFDYGNPNETLFSNYHAYLCDARFEIVSRTVASAN
WTNRYDSVVPKRETNNNTKVTKEMVAGTHMREQDSLVSLSASGYDTLKNSDTSEKEAHSL
SSLNEAVENRSDNNETKDQDSLTSMGESSGYDSFLYRVDDQDDEGFSEDSFKKSIISVKQ
EVREYEEPVKSWRVSAETIIGPLLASLLRKSASFLESELAVACRVSSVLSKLAYFPTPIL
SALLLCPGFLLQPNVPSLFQILSRLKQELDELTAGLDNVGELVDKARVFLIHREMALTRR
PQKNEGQSKSNPATQRDESPFRRVEVKRRSISSSFSSMFNRKTSLSPSQQNSNSLQNTSN
ISPAQKRPIFTQEVYWNQSITLRSILNAVILDEWLKELSAICEEHALRLTADVYENDTYI
RSVAL