New model in OGS2.0 | DPOGS215175  |
---|---|
Genomic Position | scaffold2114:- 4511-10678 |
See gene structure | |
CDS Length | 1644 |
Paired RNAseq reads   | 858 |
Single RNAseq reads   | 2174 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011016 (2e-100) |
Best Drosophila hit   | CG8654 (1e-76) |
Best Human hit | solute carrier family 22 member 1 isoform a (5e-46) |
Best NR hit (blastp)   | PREDICTED: similar to organic cation transporter [Tribolium castaneum] (2e-105) |
Best NR hit (blastx)   | PREDICTED: similar to organic cation transporter [Tribolium castaneum] (4e-93) |
GeneOntology terms    | GO:0008513 secondary active organic cation transmembrane transporter activity GO:0016021 integral to membrane GO:0055085 transmembrane transport |
InterPro families    | IPR020846 Major facilitator superfamily IPR016196 Major facilitator superfamily, general substrate transporter IPR005828 General substrate transporter |
Orthology group | ND |
Nucleotide sequence:
ATGGCAGACAAAGTCTCGGATTACATGTTTACCGCGAGCTCCTTGAGAGACGCTGCTCGT
AAGCTCTTGTTTACTGCGAGTGTTAAAAGTTCTGGTGTTGTGTTTTTGATATACAACCAT
GTTATATCAGTGACCGGACGCAACCAATCAAACATGGTCCAAGCAGTCCCGGCGGACATT
CCGAAGCAGGTGATCAAAGAGGATGTACTGGCGAGCCTCATCGGTCACTTCGGCAGGTGG
CAGCTGATGATATGTCTGACGATACCCATTATAAAGTTCTCGTCGGGCTGGGTACAAATG
GCGATAGTATTCCTCACACCAAAAACTACTTTTTGGTGCACAGACTTCGGAGACAATTCC
ACGAGAACAGGAGACAACATGACCTGCTACGATGAATGTGCGAAATACAGCTACGACGCC
TCGCCCTTCAATAATACTATCATATCAGAATGGGACCTGGTTTGTGAGAGAAGCTGGCTG
ACGAGCCTTACTCAGATGATGCTGCAGTTGGGTATCCTGCTGGGGAGCATACTTTTTGGA
TTTTTCTCTGACAGATATGGCAGAAGAAAAACTTTGTTGTTGTCCGTGGTCGGGTTGATA
GTGTTCGGATTCGCCGTGTCCTTTTCTCCAGACTACATCACGTTCACAACCTTAAGGTTC
CTCCTCGGCGTGGCAACCGCTGGAACTATGGTCGTCTCTTTTGTACTCATCATGGAGACG
ATAGGACCGAAGTATCGTGAAGTGTGTGGCTGTCTCTTTCAACTGCCTTTCATCATCGGT
CACGCGACGATGCCGATATTTGCGTTTTATAATAGAAGCTGGGACTCCTACAGTCTTGCC
ATGGCAGTTCCTCCGCTGATCTACTTAGTATTCTTCTTCACAGCACCGGAGTCTCCAAGA
TGGCTTATCTCAATGGGAAAAACAGATCAAGCAAGTCGCGTCGTCACTAAAGTAGCTGAA
ATGAATAAACTTCCGACAACCAAAGTAGAGGAGACCATAAAAAGCTTGTCCGAAGAAATC
CGCTCAAAGGCGACCACTGTGAAGCCGCACTACGGAGATCTATTTCGAGGTTCTCTGATG
ATAAAGACGATAAGTTCCTGCGTCATATGGATGATCACCGGTCTGACCTACTACGGCTTC
AACCAGTACGTCAGCCAGACCAGCCCCAACCCCTTCATCACTGTAGCAGCTGCGGGACTC
ATTCAGATTCCATCTATATTCATATCAATAGTCCTGCTCAAGTATTTCGGTCGCAAGACG
ACGATCGTTACCTTTTTTGTTTTGGGAGGTCTCTTCGTCCTAGTGTTGGGTTTAGTGTCA
GGTAGTTTCTGGACGAATTTAACACTAGCATGTGTCGGAATAAGCTGTGTGTCCGTAGTT
TGCACGTGTGTGTATATTTACACATCAGAATTGTTCCCAACCGTGGTCAGGAATATGAGT
ATGGGGGCTTGTTCCACGTGTATGAGGATCGGCTCGATGATAGCTCCTTTCATCTCCAAC
TTGTCGGAAACTGTGCCCTGGATGCCGACCGTTATTTTTGGATTCGCCCCACTTTTAGGA
GCTCTAATCTGTCTCATGCTACCAGAAACTAAAGGGACAACTCTACAGGACGTAATAGAT
AGTAAAGAAGAACAAAAAACGTGA
Protein sequence:
MADKVSDYMFTASSLRDAARKLLFTASVKSSGVVFLIYNHVISVTGRNQSNMVQAVPADI
PKQVIKEDVLASLIGHFGRWQLMICLTIPIIKFSSGWVQMAIVFLTPKTTFWCTDFGDNS
TRTGDNMTCYDECAKYSYDASPFNNTIISEWDLVCERSWLTSLTQMMLQLGILLGSILFG
FFSDRYGRRKTLLLSVVGLIVFGFAVSFSPDYITFTTLRFLLGVATAGTMVVSFVLIMET
IGPKYREVCGCLFQLPFIIGHATMPIFAFYNRSWDSYSLAMAVPPLIYLVFFFTAPESPR
WLISMGKTDQASRVVTKVAEMNKLPTTKVEETIKSLSEEIRSKATTVKPHYGDLFRGSLM
IKTISSCVIWMITGLTYYGFNQYVSQTSPNPFITVAAAGLIQIPSIFISIVLLKYFGRKT
TIVTFFVLGGLFVLVLGLVSGSFWTNLTLACVGISCVSVVCTCVYIYTSELFPTVVRNMS
MGACSTCMRIGSMIAPFISNLSETVPWMPTVIFGFAPLLGALICLMLPETKGTTLQDVID
SKEEQKT