| New model in OGS2.0 | DPOGS215291 |
|---|---|
| Genomic Position | scaffold25:- 230332-231783 |
| See gene structure | |
| CDS Length | 1452 |
| Paired RNAseq reads | 1580 |
| Single RNAseq reads | 5778 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007601 (0.0) |
| Best Drosophila hit | CG7145, isoform B (0.0) |
| Best Human hit | delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial isoform a precursor (8e-156) |
| Best NR hit (blastp) | AGAP004366-PA [Anopheles gambiae str. PEST] (0.0) |
| Best NR hit (blastx) | AGAP004366-PA [Anopheles gambiae str. PEST] (0.0) |
| GeneOntology terms | GO:0003842 1-pyrroline-5-carboxylate dehydrogenase activity GO:0006560 proline metabolic process GO:0005759 mitochondrial matrix GO:0006561 proline biosynthetic process GO:0055114 oxidation reduction |
| InterPro families | IPR016161 Aldehyde/histidinol dehydrogenase IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase 1 IPR015590 Aldehyde dehydrogenase domain IPR016160 Aldehyde dehydrogenase, conserved site IPR016162 Aldehyde dehydrogenase, N-terminal IPR016163 Aldehyde dehydrogenase, C-terminal |
| Orthology group | MCL12207 |
Nucleotide sequence:
ATGCCACATGACCATGGACGGAAATTGGCGAAGTTTTATTATGCCAGCGAGAAAACTATT
CAAAAGGCGATCCAAGCGTCCGCCGATGCTCAACGGCGTTGGGATAAAACGCCACTCGAA
GAGAGAATACGCATTTGGCAGAACGCTGCCGACCTCATGGCGGGCGCCCATCGCCAACGA
CTGAATGCAGCCACCATGCTCGGCCAGTCAAAGTCGGTTGTGCAAGCGGAAATTGATTCA
GCCGCCGAACTTATTGACTTCTTCCGTTTTAATGTTTTTTTCTTAAAAGAAAATGCAAAA
TATCAACCTATCTCTGAAAACTTGTCAGTTACAAGAAACTCGCTTAGATTTAGAGGTTTG
GACGGATTTGTTGCTGCTATAAGTCCATTCAACTTTACTGCTATTGGAGGGAATCTGGCC
TACACCCCAGCCCTCATGGGGAATGGTGTCTTATGGAAACCCTCTGATACAGCTCTGCTG
TCAAATTGGCGCATATTTAACATCATGAGAGAGGCTGGTCTTCCACCTGGTATTGTTAAC
TTTGTCCCAGCTGATGGACCTACTTTTGGTAAAACTATCACAGCTTCTTCACGGCTGGCT
GGAATTAACTTCACTGGATCTGTGCCAACTTTCAATTGGTTATGGAATGAGGTAGGAAAG
AATCTCAACAAATACCAGAACTACCCCAGACTCATTGGAGAATGTGGAGGAAAGAACTAT
CACTTTATACATCCATCTGCAGACATACAGTCTGTTGTAACAGGCACAATTCGGTCAGCT
TTTGAATATTGTGGTCAAAAGTGCTCCGCCTGCTCCAGAATGTATGTACCCAGATCCTTA
TCTGAACCAATTAAACAAGGACTGCTTGAAGAAAGGTCAAAATTGAAAATTGGTGACCCC
ACAGACTTTAAGATATTTACAGGGGCAGTTATTGACGATAAAGCCTTTGCCAGGATTACA
GGCTACATCAAGAATGCTAAAAATAATCCTAAAAACAAAATTTTGGGAGGTGGAGAATTT
GATGGAAGCAAAGGATACTTTGTGCAACCCACAATCATCGAGACAGTGGACCCATTTGAT
AAGCTGATGACAGAAGAGATCTTCGGGCCTGTCCTCACCATGTATGTTTATGAAGACAGG
GACCTGGACCAGGCGCTGGGCCTTGTAGGCTCTTCTACTAAATTTGCCTTAACAGGTGCA
GTATTTGCTACAGACCAGAAGTTCCTAGAAAGTGCTTTTGAAGAACTTAAAATGACAGCG
GGTAATTTCTACCTGAACGACAAGTCAACCGGTTCCGTCGTGGGGCAGCAGCCATTCGGA
GGAGGTCGCATGTCCGGCACCAACGACAAAGCGGGCGGACCCAACTATGTAATGCGTTGG
ACTACTCCACAGTCCATCAAGGAGACCTTCGTTCCTCTAAAAGATATTGACTACCCTTAC
ATGAGGGACTAA
Protein sequence:
MPHDHGRKLAKFYYASEKTIQKAIQASADAQRRWDKTPLEERIRIWQNAADLMAGAHRQR
LNAATMLGQSKSVVQAEIDSAAELIDFFRFNVFFLKENAKYQPISENLSVTRNSLRFRGL
DGFVAAISPFNFTAIGGNLAYTPALMGNGVLWKPSDTALLSNWRIFNIMREAGLPPGIVN
FVPADGPTFGKTITASSRLAGINFTGSVPTFNWLWNEVGKNLNKYQNYPRLIGECGGKNY
HFIHPSADIQSVVTGTIRSAFEYCGQKCSACSRMYVPRSLSEPIKQGLLEERSKLKIGDP
TDFKIFTGAVIDDKAFARITGYIKNAKNNPKNKILGGGEFDGSKGYFVQPTIIETVDPFD
KLMTEEIFGPVLTMYVYEDRDLDQALGLVGSSTKFALTGAVFATDQKFLESAFEELKMTA
GNFYLNDKSTGSVVGQQPFGGGRMSGTNDKAGGPNYVMRWTTPQSIKETFVPLKDIDYPY
MRD