| New model in OGS2.0 | DPOGS215304 |
|---|---|
| Genomic Position | scaffold25:- 40967-41436 |
| See gene structure | |
| CDS Length | 330 |
| Paired RNAseq reads | 17 |
| Single RNAseq reads | 105 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | Lsm11 (1e-10) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000018479 [Nasonia vitripennis] (7e-12) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000018479 [Nasonia vitripennis] (5e-11) |
| GeneOntology terms | GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome GO:0005634 nucleus GO:0005683 U7 snRNP GO:0016604 nuclear body GO:0071254 cytoplasmic U snRNP body GO:0006398 histone mRNA 3'-end processing GO:0006397 mRNA processing |
| InterPro families | IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type IPR001163 Like-Sm ribonucleoprotein (LSM) domain |
| Orthology group | MCL16579 |
Nucleotide sequence:
ATGCCACTTTTGATTTCGCAGGTAATAACGAGACACGCGACCGGCGTCCGGGGAGAACTC
TACGGGACCCTGGTGGCCTTCGACAAGCAGTGGAACCTCGCGCTACGTGACGTGGTCGAG
GTGTGGCGGAGGAAGGCTCCAGGGAAGAGGAAAATACCACCCGGGTTAGGTACCCCAGTA
CAGAAAGGTACTGCGGCCGCTATATCGCCTGTGCCAGTGGTGACGGAGACTCCCTTGGGT
GGCGGCAGGTGGGAGTGCACCAGACACCTCCCCCAGATGATGGTACGTGGGGAACATGTG
GTGTTGGTGAACGTGGTGGAGAGGCGGTGA
Protein sequence:
MPLLISQVITRHATGVRGELYGTLVAFDKQWNLALRDVVEVWRRKAPGKRKIPPGLGTPV
QKGTAAAISPVPVVTETPLGGGRWECTRHLPQMMVRGEHVVLVNVVERR