| New model in OGS2.0 | DPOGS215338 |
|---|---|
| Genomic Position | scaffold25:+ 131703-133499 |
| See gene structure | |
| CDS Length | 1728 |
| Paired RNAseq reads | 536 |
| Single RNAseq reads | 1368 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007972 (0.0) |
| Best Drosophila hit | CG10347, isoform A (1e-42) |
| Best Human hit | nudC domain-containing protein 1 isoform 1 (3e-67) |
| Best NR hit (blastp) | PREDICTED: similar to NudC domain containing 1 [Tribolium castaneum] (8e-104) |
| Best NR hit (blastx) | PREDICTED: similar to NudC domain containing 1 [Tribolium castaneum] (3e-103) |
| GeneOntology terms | GO:0008150 biological_process GO:0005575 cellular_component GO:0003674 molecular_function |
| InterPro families | IPR007052 CS-like domain IPR008978 HSP20-like chaperone IPR017447 CS domain |
| Orthology group | MCL15252 |
Nucleotide sequence:
ATGCCGTCTGTACTTGTTGAGTTGAGACCTAATAAAAAGCTTCTCGATCATGAATTTGAA
GGATACAAAATAAATCTACAAAGTCTAGCTCAATATAATTTGAAACTAACCACTACAGCC
GACCGGCTCTATCCCGATGAAGTGCAATACTCCTTCGTACATGCGAAATTATTTGCTTTG
CACAATCACCTAATATTTGATGTATGGGATCATCAATACAACTTTTACTATATTGATAAT
CAGCAGCAAGTTATTAACGTCACATTTGATAATATAAACAATTCATTCCAAACGGCTGTA
GTATATGATATCCCACAACATGTTGAAAGAAAACCTGGCCATTTCAACCTTTGTTTAACA
TTTCCTGCAAACTATTTAGCAATAATCAGTGATGGTACTGGTTTCCTACACATAGTTGAT
ACCGGGACAAGAAACAGACCTGCCACTGATAAACAACCATGGAACACAATACATTCAAGT
CTAGCTCTCGGTGAGGGTAAATATTTTACTGTTGTTGATAGTAGAATGCAAAAAAAGTGT
AATGTTGACATATTACATTGTCTGTTACAATCTGTTGAACAGAATGACAATCATTTTGAT
ACAGTTTTGACCTGGCTTTCGTTTGAATTTATTGATCATAAATGGAAACAGTTTGCAAAG
AGGGAGGTCAAAGGTAAAGGTATAGTACACTATGCAGCATTTGAAACCCAATGTCAAGCT
TTGTACATAGCATCTGACAATATGTTTAAATTTACTTCTGATTCTGTTAAAAATATATTA
CCACCACAACAACCAGAACAGAAACCAATAATATACACATGGTTGCAGACGGCTGATGAT
ATCACAGTTACTCTGAAATTGGAAGATAATTTTGACAAAAAATTGCTCTTTGTACATGTA
ACGCCATTATCAATTAAAATACGTTATGCAGGAAAAGAGTTTGTGAGTGGTAAACTGAAA
AATAAAGTTGACAGTGAATTGACAACTTGGAATATACAGGATAACGGGCAAGTAGATGTT
TTGATAACAAAGTCTGAAAGTGACATGTGGAACGAACTTATTGAGGGAGGGGACCAGAAT
GGAAAAGAAATATTGGATGCTTCACTTGTTGAAGAGATCCACCAAAGATTGGCTCATTTA
TGTTCAGAAACAGAGGTTATGTCCGACCAGCCTCTAACAAGCCTCGCTTCCCAGGAGTTA
GAGGAATGTGATGCTGCATCTGAGGAAGACACAGTCTTAGCACGGTTAGATACAACAACC
CATGAAATAACCCACAGGATACCCCTCAGTGTGCATCATTATTTATTCAGCATTAACTTA
GAAACACATGAAGCACCGGCCCTGGTCTTGAGACATGATGTGGATGGATGTGTGTGGCAG
CCCTTCACACAACCTTTCAACTCAGACTCTTGGCCGATCAAACACTACGGTACTCTAATG
GCCTTTGGATATGTGCAGTCTTCAAAGACAAATCGTAAATTTGTTACATGTGCACCAAAC
TTCTCATATAGTGTTGTGTGTGAAGCCAAGAAACACATATTCATATACAAATGTGCAGCG
GAAGAGACTCAGTTGAGACGGAGGACAGCTGGAGTCATGAAGACAATTAAAGTGGGACAA
CAACATGTCATTAATATTGACATGTTCGGAGAGGTGTTAGGAGTGCATGCTACAAATGAA
TACTTGTTTGTCTTAACAGAGAAAAATCTTATAGCGATATGTATTTAA
Protein sequence:
MPSVLVELRPNKKLLDHEFEGYKINLQSLAQYNLKLTTTADRLYPDEVQYSFVHAKLFAL
HNHLIFDVWDHQYNFYYIDNQQQVINVTFDNINNSFQTAVVYDIPQHVERKPGHFNLCLT
FPANYLAIISDGTGFLHIVDTGTRNRPATDKQPWNTIHSSLALGEGKYFTVVDSRMQKKC
NVDILHCLLQSVEQNDNHFDTVLTWLSFEFIDHKWKQFAKREVKGKGIVHYAAFETQCQA
LYIASDNMFKFTSDSVKNILPPQQPEQKPIIYTWLQTADDITVTLKLEDNFDKKLLFVHV
TPLSIKIRYAGKEFVSGKLKNKVDSELTTWNIQDNGQVDVLITKSESDMWNELIEGGDQN
GKEILDASLVEEIHQRLAHLCSETEVMSDQPLTSLASQELEECDAASEEDTVLARLDTTT
HEITHRIPLSVHHYLFSINLETHEAPALVLRHDVDGCVWQPFTQPFNSDSWPIKHYGTLM
AFGYVQSSKTNRKFVTCAPNFSYSVVCEAKKHIFIYKCAAEETQLRRRTAGVMKTIKVGQ
QHVINIDMFGEVLGVHATNEYLFVLTEKNLIAICI