| New model in OGS2.0 | DPOGS215340 |
|---|---|
| Genomic Position | scaffold25:+ 147053-159979 |
| See gene structure | |
| CDS Length | 1119 |
| Paired RNAseq reads | 732 |
| Single RNAseq reads | 2931 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007975 (1e-56) |
| Best Drosophila hit | CG8671, isoform A (1e-49) |
| Best Human hit | early estrogen-induced gene 1 protein isoform a (4e-45) |
| Best NR hit (blastp) | PREDICTED: similar to Protein FAM102A (Early estrogen-induced gene 1 protein) [Tribolium castaneum] (2e-64) |
| Best NR hit (blastx) | PREDICTED: similar to RE17452p [Nasonia vitripennis] (1e-57) |
| GeneOntology terms | GO:0033227 dsRNA transport |
| InterPro families | IPR019448 Oestrogen-responsive protein Fam102A/B, N-terminal |
| Orthology group | MCL13624 |
Nucleotide sequence:
ATGTCCAAGAAGAAGCGATACAAGTTCGGGGTGCAGTGCTGCCTCGAGGAACTGACCGAG
GTGCCGTTCGTGTCGGCGGTGCTGTTCGCTAAGGTGCGCCTTCAGGACGGAGGGACCTTC
CAGGATCACTCCAGCAGGGAGGAGGTGAGGAACCACGCCGTCCGGTGGAACGCTCAGTTC
TCGTTCGTGTGTAAGATGTGCGCCAACGCCAACACCGGGGTGTTGGAGCCAGCGAGGCTC
AGGGTCTCCGTCAGGAAGGAGTGCAAGGGTGGACGATCCTACCAGAAGCTGGGCTTCTGC
GATGTGAACCTGGCGGAGCTGGCGGGCGCCGGGGAGACGGTCCGCCGCTGTCTGCTGGAG
GGATACGACCCTAACAGGAGGCAGGACAACTCCGTGCTCAGGATACGAATCAAGATGAAC
ATGATCTCAGGGGACCCGCTCTTTAAAGTACCTGAGAGGAAACAGGAAGCGGCAGAGAAG
ACGGGCGCGGACAGCGGGTCGGAGAGCACCGCGCCCGCCGACGACGACGCCGCCTCTTCG
GGCACCAGCTCGGGCTTCGGGTCCCTCACCAAGAAGAAGAACTACGAAGGTGTGACGCCA
GCACTGTCGTCTCTACCGTCCTGCGAGCTGCCCTCGCCGGAGGGAGAGGAGCTGCCACCT
GTACCAGTGCTGCCCCCGCCCGCCCCCGCTTCCGCCGCCGCCCCCGTCCCCGTCCCGACG
ACCATCAGCGACTACCCCGGAGTGGTGGTAGTGACGACTCAGCCGGGCGCGGGGGCTGCG
GGGGTCGCGGGCGCCGCCGGGGGATGTGTCGCCTGTCTGCAGCACACTCACTCGAGGAAC
TCCTCCAACACCTCGGGGGACATGAGCAGCAAAGCCTCGGGCTACGGCAGCTCGGTGTCG
GCGGCGTCCGCACACTCGAGACAGAGCTCCGAGGGGGAGTCGACGGGGGACTGCAGACCC
CACCACAACAGGTACGTCGATAACACACACTGCGGGCCGCCGGGGTCACACCCCGCGACT
CGCAGACGGTTACTGTTAAATGAAATTAAAAATATAAACCTTCGGCTGGAGGGCGGCACG
AGAGGGACGAACCTCGTGACCGAGGGCGACACGGCGTGA
Protein sequence:
MSKKKRYKFGVQCCLEELTEVPFVSAVLFAKVRLQDGGTFQDHSSREEVRNHAVRWNAQF
SFVCKMCANANTGVLEPARLRVSVRKECKGGRSYQKLGFCDVNLAELAGAGETVRRCLLE
GYDPNRRQDNSVLRIRIKMNMISGDPLFKVPERKQEAAEKTGADSGSESTAPADDDAASS
GTSSGFGSLTKKKNYEGVTPALSSLPSCELPSPEGEELPPVPVLPPPAPASAAAPVPVPT
TISDYPGVVVVTTQPGAGAAGVAGAAGGCVACLQHTHSRNSSNTSGDMSSKASGYGSSVS
AASAHSRQSSEGESTGDCRPHHNRYVDNTHCGPPGSHPATRRRLLLNEIKNINLRLEGGT
RGTNLVTEGDTA