| New model in OGS2.0 | DPOGS215345 |
|---|---|
| Genomic Position | scaffold25:+ 192569-193532 |
| See gene structure | |
| CDS Length | 546 |
| Paired RNAseq reads | 24 |
| Single RNAseq reads | 264 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007978 (1e-44) |
| Best Drosophila hit | Rox8, isoform D (4e-08) |
| Best Human hit | U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform b (2e-29) |
| Best NR hit (blastp) | PREDICTED: similar to U11/U12 snRNP 35K [Tribolium castaneum] (1e-50) |
| Best NR hit (blastx) | U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis] (1e-35) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0003676 nucleic acid binding GO:0008150 biological_process GO:0005634 nucleus GO:0003723 RNA binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL16661 |
Nucleotide sequence:
ATGTTTGACAAAGATTTTACCAAATATGCAACGACGACATATGATCCAATAAAAATAGGT
TCAATAGACGGTACTGACACTGCTCCTCATGACCATGGGATTGTAAGAGCACTGAACTCT
GAGTATGTTCCGAATAAAAAAGTTAAAGGTGATCCCAATCATACTATATTTGTCGCCAGA
CTGAACCCGAGGACGACAGAGGATACAATATATTCAGAATTTTCAAAATTTGGAAAAGTG
ATCAACTGCAGACTTGTGAAGGACATAGTGACTGGAAAATCAAAGCAGTATGCTTTCGTA
GAATATGAGAACTTGTCTAGTTTGGATGGAGCTTTAAAGGATATGAACAATGAATATTTA
GATAGTTTTGAGATCATAGTGGAGCGGGAAGCAGAAAGGCGTCTCAGAGGGTGGAGGCCG
AGACGGCTCGGGGGAGGATTCGGGGGTCGGAAGGAATCTGGGCAGCTGAGATTTGGATGC
AGAGAAAGACCCTTCAGAAAACCAATAGTAATTAATCCTAAAAATGTCAAAGTAGAACCT
AAATAG
Protein sequence:
MFDKDFTKYATTTYDPIKIGSIDGTDTAPHDHGIVRALNSEYVPNKKVKGDPNHTIFVAR
LNPRTTEDTIYSEFSKFGKVINCRLVKDIVTGKSKQYAFVEYENLSSLDGALKDMNNEYL
DSFEIIVEREAERRLRGWRPRRLGGGFGGRKESGQLRFGCRERPFRKPIVINPKNVKVEP
K