| New model in OGS2.0 | DPOGS210802 |
|---|---|
| Genomic Position | scaffold1289:- 1785-6178 |
| See gene structure | |
| CDS Length | 1218 |
| Paired RNAseq reads | 2457 |
| Single RNAseq reads | 7924 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007118 (0.0) |
| Best Drosophila hit | CG5590 (3e-141) |
| Best Human hit | hydroxysteroid dehydrogenase-like protein 2 isoform 1 (2e-113) |
| Best NR hit (blastp) | hydroxysteroid dehydrogenase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | hydroxysteroid dehydrogenase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0032934 sterol binding GO:0055114 oxidation reduction GO:0005811 lipid particle GO:0005875 microtubule associated complex |
| InterPro families | IPR003033 SCP2 sterol-binding domain IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain |
| Orthology group | MCL12679 |
Nucleotide sequence:
ATGAGTTTAGTTGCGAATACAGGGAAGTTGGCTGGTCGTACCCTATTCATAACGGGAGCA
TCCCGTGGTATTGGTAAAGCTATCGCACTCAAAGCGGCCAAAGATGGAGCTAACGTTGTT
GTTGCCGCTAAAACCGCAGAACCTCATCCCAAATTACCGGGAACTATTTACACGGCCGCA
GAAGAGATTGAGGCTCTTGGTGGAAAAGCTTTGCCTTGCATTGTTGATGTGAGAGATGAG
AAACAGATTCAGAAAGCCATCGATGAAGCTGTTAAAAAGTTCAATGGCATTGATATACTC
ATAAACAATGCTTCGGCCATATCACTCACTGGGACTGCGGAGACCGATATGAAGAGATAC
GACCTCATGCACAATATTAACACCAGGGGCACATTTTTGGCATCAAAACTATGCCTGCCG
TTGTTGAAAGAAAGCAACCACGCTCACATCCTAAACCTGTCGCCACCACTTAACATGAAT
CCTTATTGGTTTTCACTGCACGTTGCTTACACAATGGCTAAATATGGGATGTCTATGTGT
GTGCTGGGGATGAGTGAAGAATTTAGACAATTCAATATTGGGGTTAATGCACTTTGGCCA
AAAACTGCTATCGCGACAGCCGCCATTGAAATGTTGACTGGCGACACTTCGTCCAGTCGC
AAACCGGAAATAGTCTCAGATGCTGCCTACGTCATGTTGAGCAAAGACCCTAAATCATAC
ACGGGCAAGTTTGAGATAGATGAAGATGTAGTTAAATCAGTCGGAATCAAAGACCTCGCG
CCCTATGCTTGTGATCCAAGTAATGTTAACAATTTGTTACCTGACTTCTTTTTGGATTTA
CCCGGGCACCAAACGCAAGAGGTCAAAAAGAGTGAGCCGGCAGGACAGATCCCGGAACTA
TTTTCAGTTATCAACAAGACGATAACACCTGAATTAGTTAAAAAAACACAGGCCGTGTTC
CAGTTTAATGTGAAAGGTAAAGAGGAAGGTATATGGCACCTCGATCTCAAGAACGGTGAC
GGAGCCTGCGGTCAGGGGGAACCAAAACATGCACCCGATGCCACCCTCACCATGGACAGC
ACCAACTTCGCTGATATGTTCGCTGGGAAATTGAAGCCGACCACAGCCTTTATGATGGGC
AAGCTGAAAATAAAGGGGGACATGCAGAAGGCGATGAAACTCGAGAAAATGATGAAATCA
CTCAAAGCTAAAGTGTAA
Protein sequence:
MSLVANTGKLAGRTLFITGASRGIGKAIALKAAKDGANVVVAAKTAEPHPKLPGTIYTAA
EEIEALGGKALPCIVDVRDEKQIQKAIDEAVKKFNGIDILINNASAISLTGTAETDMKRY
DLMHNINTRGTFLASKLCLPLLKESNHAHILNLSPPLNMNPYWFSLHVAYTMAKYGMSMC
VLGMSEEFRQFNIGVNALWPKTAIATAAIEMLTGDTSSSRKPEIVSDAAYVMLSKDPKSY
TGKFEIDEDVVKSVGIKDLAPYACDPSNVNNLLPDFFLDLPGHQTQEVKKSEPAGQIPEL
FSVINKTITPELVKKTQAVFQFNVKGKEEGIWHLDLKNGDGACGQGEPKHAPDATLTMDS
TNFADMFAGKLKPTTAFMMGKLKIKGDMQKAMKLEKMMKSLKAKV