| New model in OGS2.0 | DPOGS202096 |
|---|---|
| Genomic Position | scaffold326:- 66601-67935 |
| See gene structure | |
| CDS Length | 843 |
| Paired RNAseq reads | 71 |
| Single RNAseq reads | 180 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002940 (3e-70) |
| Best Drosophila hit | CG4842 (2e-26) |
| Best Human hit | 15-hydroxyprostaglandin dehydrogenase [NAD+] isoform 1 (4e-23) |
| Best NR hit (blastp) | putative alcohol dehydrogenase [Bombyx mori] (4e-47) |
| Best NR hit (blastx) | putative alcohol dehydrogenase [Bombyx mori] (1e-50) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0005488 binding GO:0008152 metabolic process GO:0003824 catalytic activity GO:0055114 oxidation reduction GO:0005575 cellular_component |
| InterPro families | IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR016040 NAD(P)-binding domain |
| Orthology group | MCL11514 |
Nucleotide sequence:
ATGTTTGATCTAAAAAATAAAATCGTTTTGATCACTGGAGGATCTCAAGGCATTGGTGCC
AAAGCTATCGAGTTTTTACTCCAAGAGAATATAAAGCATATTGCTAATTTAGATGTAGCA
GAGAAAGCTGGTGTTGCTCAGCAAGATGAGTTAAATAAAAAGTACGGTACAAATATACTT
AAATTTTATAAATGCGATGTTTCAAATGAGGAACAGTTGATGGGTGCTTATCAAACGATT
TTGGACGAGCAAGGATCCATCGATATTGTAATCAATAATGCGGGAATCGCAAACGACAGT
AAAGAAAAATATAAGAAAGAAATTGATATTAATTTTTTAGCTGCAACGACTAGCACGCTA
AAAGCAATTGAGATAATGCGTAAAGATGAAGGAGGCAATGGTGGTGTAGTCTTAAATATC
TCTTCTGCTGCGGCGTTGTGTCAAGACGAATTATTACCCATCTATGCCGCAACTAAAAGC
GCGATTTTGCAATTTAGCAATTGTATCGGGATGCCAAAATATTATTCAAGAACTGGAGTA
CGTGTGGTAACATTATGTTATGGAGGGACTGAATCTCATATTTTCCGTGACTTTGACACT
ATAGACAAAACATTTGTAAACCACTTCAACGAAGTTATTGTGAAAGTGTTCCCCCCACAG
AAGGTGGAATCTGCAGCTTCCGCTCTGGTCGAGGTCCTAAAGAATGGCGAAAGTGGAAGT
ACTTGGATGTCAGCTAACAATAAACCGGTTCAAGATATAACACCTACTATAAAGAAAGCA
TATGGAATCATGTCAGAAGCCTATACCAATTTTTATGCTGACTCTTTTGAAAAGGCTTCA
TAA
Protein sequence:
MFDLKNKIVLITGGSQGIGAKAIEFLLQENIKHIANLDVAEKAGVAQQDELNKKYGTNIL
KFYKCDVSNEEQLMGAYQTILDEQGSIDIVINNAGIANDSKEKYKKEIDINFLAATTSTL
KAIEIMRKDEGGNGGVVLNISSAAALCQDELLPIYAATKSAILQFSNCIGMPKYYSRTGV
RVVTLCYGGTESHIFRDFDTIDKTFVNHFNEVIVKVFPPQKVESAASALVEVLKNGESGS
TWMSANNKPVQDITPTIKKAYGIMSEAYTNFYADSFEKAS