New model in OGS2.0 | DPOGS202098  |
---|---|
Genomic Position | scaffold326:- 49753-52517 |
See gene structure | |
CDS Length | 807 |
Paired RNAseq reads   | 180 |
Single RNAseq reads   | 465 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002944 (9e-75) |
Best Drosophila hit   | photoreceptor dehydrogenase, isoform A (4e-27) |
Best Human hit | 15-hydroxyprostaglandin dehydrogenase [NAD+] isoform 1 (1e-24) |
Best NR hit (blastp)   | putative alcohol dehydrogenase [Bombyx mori] (1e-50) |
Best NR hit (blastx)   | putative alcohol dehydrogenase [Bombyx mori] (1e-54) |
GeneOntology terms    | GO:0016491 oxidoreductase activity GO:0005488 binding GO:0008152 metabolic process GO:0003824 catalytic activity GO:0055114 oxidation reduction GO:0005575 cellular_component |
InterPro families    | IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR016040 NAD(P)-binding domain |
Orthology group | MCL39708 |
Nucleotide sequence:
ATGAATGACGTCAGAGATCTAGTTGTTCTGGTCACCGGCGGTTCGAACGGCATTGGCGCT
GGTATAGTTCGAACTGTTTTGGCTCGCGGAGCAAAGCATGTTGTCATATTAGACATCAAT
ATAACGCAAGGGCAGGCTTTGGAAGCTGAATTGAACTCAAAATATGGTATCAATAAAGTA
AAATTTATAAAGTGCGATGTAGCAAGTAACGAACTCCATGCAGCCTTCGAGGAAGCCGTT
CAGCTTTTTGGGTATTTGGACGTTGTTATTAACAATGCTGGTATTATGAATGATAGCCCT
CAAGTGTATGAAAAGGAAATAACAATCAATTTTACAGCTGTTATAACAGGGTCACTAAAG
GCTTTCGAAATAATGCGTAAAGATAGAAATGGGAAAGGAGGCACCATTGTCAACATATCC
TCTGTCGTCGCCCTAATACAAAGCTCTTTACTCCCTGTTTATAGTGCAACGAAGAGCGCT
GTATTGCAGTTCAGCAATTGTCTTGGCAAGATTGAAACTTATAATAGGACTGGAGTACGA
GTGGTGACTGTTTGCTTTGGTGCGACGGACACAAGTTTGATTGTCAAAGTTGGATGCATT
GACAAGGAATTAGAAGAAATGGTGCCAGCAGCAATGGAAAAAATGCCATTACAGGGAGTT
GACGCTGCTGTTTCTGGCTTAATACACGCGTTCGAAAACGGAGCCAGCGGCAGCACGTGG
CTGGTGACGTCTGGGAGACCTGCCGAGGAAATCACCGGAAACGTCACCAAGGCATACGAA
ATACTGAGTCAAGGTGTATACAAGTAG
Protein sequence:
MNDVRDLVVLVTGGSNGIGAGIVRTVLARGAKHVVILDINITQGQALEAELNSKYGINKV
KFIKCDVASNELHAAFEEAVQLFGYLDVVINNAGIMNDSPQVYEKEITINFTAVITGSLK
AFEIMRKDRNGKGGTIVNISSVVALIQSSLLPVYSATKSAVLQFSNCLGKIETYNRTGVR
VVTVCFGATDTSLIVKVGCIDKELEEMVPAAMEKMPLQGVDAAVSGLIHAFENGASGSTW
LVTSGRPAEEITGNVTKAYEILSQGVYK