| New model in OGS2.0 | DPOGS202098 |
|---|---|
| Genomic Position | scaffold326:- 49753-52517 |
| See gene structure | |
| CDS Length | 807 |
| Paired RNAseq reads | 180 |
| Single RNAseq reads | 465 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002944 (9e-75) |
| Best Drosophila hit | photoreceptor dehydrogenase, isoform A (4e-27) |
| Best Human hit | 15-hydroxyprostaglandin dehydrogenase [NAD+] isoform 1 (1e-24) |
| Best NR hit (blastp) | putative alcohol dehydrogenase [Bombyx mori] (1e-50) |
| Best NR hit (blastx) | putative alcohol dehydrogenase [Bombyx mori] (1e-54) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0005488 binding GO:0008152 metabolic process GO:0003824 catalytic activity GO:0055114 oxidation reduction GO:0005575 cellular_component |
| InterPro families | IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR016040 NAD(P)-binding domain |
| Orthology group | MCL39708 |
Nucleotide sequence:
ATGAATGACGTCAGAGATCTAGTTGTTCTGGTCACCGGCGGTTCGAACGGCATTGGCGCT
GGTATAGTTCGAACTGTTTTGGCTCGCGGAGCAAAGCATGTTGTCATATTAGACATCAAT
ATAACGCAAGGGCAGGCTTTGGAAGCTGAATTGAACTCAAAATATGGTATCAATAAAGTA
AAATTTATAAAGTGCGATGTAGCAAGTAACGAACTCCATGCAGCCTTCGAGGAAGCCGTT
CAGCTTTTTGGGTATTTGGACGTTGTTATTAACAATGCTGGTATTATGAATGATAGCCCT
CAAGTGTATGAAAAGGAAATAACAATCAATTTTACAGCTGTTATAACAGGGTCACTAAAG
GCTTTCGAAATAATGCGTAAAGATAGAAATGGGAAAGGAGGCACCATTGTCAACATATCC
TCTGTCGTCGCCCTAATACAAAGCTCTTTACTCCCTGTTTATAGTGCAACGAAGAGCGCT
GTATTGCAGTTCAGCAATTGTCTTGGCAAGATTGAAACTTATAATAGGACTGGAGTACGA
GTGGTGACTGTTTGCTTTGGTGCGACGGACACAAGTTTGATTGTCAAAGTTGGATGCATT
GACAAGGAATTAGAAGAAATGGTGCCAGCAGCAATGGAAAAAATGCCATTACAGGGAGTT
GACGCTGCTGTTTCTGGCTTAATACACGCGTTCGAAAACGGAGCCAGCGGCAGCACGTGG
CTGGTGACGTCTGGGAGACCTGCCGAGGAAATCACCGGAAACGTCACCAAGGCATACGAA
ATACTGAGTCAAGGTGTATACAAGTAG
Protein sequence:
MNDVRDLVVLVTGGSNGIGAGIVRTVLARGAKHVVILDINITQGQALEAELNSKYGINKV
KFIKCDVASNELHAAFEEAVQLFGYLDVVINNAGIMNDSPQVYEKEITINFTAVITGSLK
AFEIMRKDRNGKGGTIVNISSVVALIQSSLLPVYSATKSAVLQFSNCLGKIETYNRTGVR
VVTVCFGATDTSLIVKVGCIDKELEEMVPAAMEKMPLQGVDAAVSGLIHAFENGASGSTW
LVTSGRPAEEITGNVTKAYEILSQGVYK