| New model in OGS2.0 | DPOGS202099 |
|---|---|
| Genomic Position | scaffold326:- 33857-36809 |
| See gene structure | |
| CDS Length | 768 |
| Paired RNAseq reads | 287 |
| Single RNAseq reads | 668 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002945 (2e-37) |
| Best Drosophila hit | CG4842 (3e-06) |
| Best Human hit | 15-hydroxyprostaglandin dehydrogenase [NAD+] isoform 2 (2e-11) |
| Best NR hit (blastp) | putative alcohol dehydrogenase [Bombyx mori] (2e-48) |
| Best NR hit (blastx) | putative alcohol dehydrogenase [Bombyx mori] (4e-38) |
| GeneOntology terms | GO:0006693 prostaglandin metabolic process GO:0016404 15-hydroxyprostaglandin dehydrogenase (NAD+) activity GO:0070403 NAD binding |
| InterPro families | IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain |
| Orthology group | ND |
Nucleotide sequence:
ATGGAAGACGTGAGTTATTCTATTGAAGGGAAAGTGGTTCTGGTCGCGGGCGGTGTAATT
GGTATTGGAGCAGGCTTAATACGATATTTGGTTTCACATAATGCTATGTACGTCGTTTTC
TTAGATGTATTGGAGCGTGAAGGGGAGGTTCTTGAGAGAGAACTATTGAACCAATACGGT
GGCCTAAAAGCAAAGTTCATAAAATGTGACATAACTGACGAAGAACAACTTTTAAGTGCA
TACAATCAGGTATTAGAGAAATATAGAAGAATCGATGCTGTAATAAACAACGTGATGGTA
GCTAATAATGACAACTTGGAAAAGATGATTGATGCGAGTTATAATACGGTGATTGCAAGT
ACGTTTAATGCTTTGGAGGAAATGCGTGCAGATAAATCGGGCAGTGGTGGTGTTATATTA
AATCTATCGTCATTTTTGGGCTTAACTCAACGCAATAATATCTTATTAGAACTAAGTAAG
GAGGTTGAGAATCGAGAACCATTTTCAAAGACAAAAGTCCGTATAATCACAGCTTTTTTG
GGGCCGACTGATACAGCACTCTTGCATATATCCAACTACATAGAAAATCAGAATAACTTA
AGCGGAGACATTTTTGAGACTCAGAGGGTAACATCAGCTGTAACCGGTGTAATTGACGTC
ATAACTCGGGCCGAGAGCGGCTCCACCTGGATAATTGTCAATGACAAACCACCTTTCGAA
GTAACGGACGTAAAGGGATTCGACGTTCCTGATATAAATACGATCTAA
Protein sequence:
MEDVSYSIEGKVVLVAGGVIGIGAGLIRYLVSHNAMYVVFLDVLEREGEVLERELLNQYG
GLKAKFIKCDITDEEQLLSAYNQVLEKYRRIDAVINNVMVANNDNLEKMIDASYNTVIAS
TFNALEEMRADKSGSGGVILNLSSFLGLTQRNNILLELSKEVENREPFSKTKVRIITAFL
GPTDTALLHISNYIENQNNLSGDIFETQRVTSAVTGVIDVITRAESGSTWIIVNDKPPFE
VTDVKGFDVPDINTI