| New model in OGS2.0 | DPOGS202127 |
|---|---|
| Genomic Position | scaffold326:+ 61527-63194 |
| See gene structure | |
| CDS Length | 837 |
| Paired RNAseq reads | 178 |
| Single RNAseq reads | 440 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002942 (2e-70) |
| Best Drosophila hit | photoreceptor dehydrogenase, isoform A (1e-25) |
| Best Human hit | 15-hydroxyprostaglandin dehydrogenase [NAD+] isoform 1 (4e-22) |
| Best NR hit (blastp) | putative alcohol dehydrogenase [Bombyx mori] (2e-43) |
| Best NR hit (blastx) | putative alcohol dehydrogenase [Bombyx mori] (6e-48) |
| GeneOntology terms | GO:0004022 alcohol dehydrogenase (NAD) activity GO:0055114 oxidation reduction GO:0005488 binding GO:0006911 phagocytosis, engulfment GO:0042574 retinal metabolic process GO:0004745 retinol dehydrogenase activity GO:0042572 retinol metabolic process |
| InterPro families | IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR016040 NAD(P)-binding domain |
| Orthology group | MCL10279 |
Nucleotide sequence:
ATGTTTAATTTGTCAGATAAAGTTGCAATTGTGACGGGAGGAGCTAATGGTATTGGAGCT
GAAATTGTAAAGGAATTCCTCAATGAAGGTGTAAAGTATGTTGCTATTTTGGATATAAAC
GATGAAGCGGGAAAAGCACTTGAAAAAGAACTGGCTGTAAAACATGGTGAAGGAAAAGGA
AAATTTTTTATTTGTGATGTAACCAATGATGAACAACTGTTCGGTATTTTTGATGAAGTC
ATGAAAGAATTCGGAGCTATAGACGTGATTGTTAATAATGCTGGAATTGCTCGTGATACG
TTAGAACTTTATAAGAAAGAAATTGAAATCAACTTTACGGCTACAGTAACATCCACTTTG
AAGGCTGTTGAGCTGATGCGAGTAGATAAAGGAGGGAGAGGTGGTACAGTTATAAACATA
TCATCAGTTGCTGGCATAACGCAACTTTCACCATCCGTATTTGTGTATGGGGCAACTAAG
AGCGCCGTTTTACATTTTAGCTGTTGTATAGGAAAAGAGGCTTACTATCGCTACACTAAT
GTGCGAGTAATAACGATGTGTTTTGGTTTAACTGACACCGAAATCGTGACGAATATGAAC
AGTTTTGATGACATCGTCAACGAAAGAATTGAACAATTAGTTGGTCTGCATCACCATCAA
AAAATTCTACAAAGCTCTAATATCGCTGCCAAGGGCGTAGTGCAAGCATACAACACCGGC
AGCAGTGGAAGCACTTGGCTTGTCGATAACAGTAAAATAATAGATATTACAGAGAATGTA
GATGAAAGTTATAAAATTATGTCAAAGAAAACTGTGTTATCTGAAATATTGTCATAA
Protein sequence:
MFNLSDKVAIVTGGANGIGAEIVKEFLNEGVKYVAILDINDEAGKALEKELAVKHGEGKG
KFFICDVTNDEQLFGIFDEVMKEFGAIDVIVNNAGIARDTLELYKKEIEINFTATVTSTL
KAVELMRVDKGGRGGTVINISSVAGITQLSPSVFVYGATKSAVLHFSCCIGKEAYYRYTN
VRVITMCFGLTDTEIVTNMNSFDDIVNERIEQLVGLHHHQKILQSSNIAAKGVVQAYNTG
SSGSTWLVDNSKIIDITENVDESYKIMSKKTVLSEILS