| New model in OGS2.0 | DPOGS212868 |
|---|---|
| Genomic Position | scaffold6121:- 2946-5927 |
| See gene structure | |
| CDS Length | 993 |
| Paired RNAseq reads | 382 |
| Single RNAseq reads | 1077 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000813 (5e-113) |
| Best Drosophila hit | CG30491 (2e-75) |
| Best Human hit | retinol dehydrogenase 12 (1e-54) |
| Best NR hit (blastp) | short-chain dehydrogenase [Aedes aegypti] (1e-87) |
| Best NR hit (blastx) | short-chain dehydrogenase [Aedes aegypti] (1e-83) |
| GeneOntology terms | GO:0005488 binding GO:0016491 oxidoreductase activity GO:0055114 oxidation reduction |
| InterPro families | IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain |
| Orthology group | MCL11332 |
Nucleotide sequence:
ATGTGGGTGCCCAACTTGCCGGTGACGGTGCTCACCGGGCTCGCAGCGGGTGCGGGCGTC
ATCTGTATATTTAAGGACATCTACGGTGGCCCACCTTTCGATAAAAAAGTACTAGCTGAT
GGCAAGACGGTGATATTGACGGGCGCCACCAGCGGCATCGGCAGTAAAGCTGCTTGGGAC
TTTGCAAAACGAGGGGCCAAAGTGTTCATGGCGTGCCGTGACATGAAGAAGTGCGAGGAG
GTACGACGGGAGATAGTGCTGGACACTGGGAACAAGTTCGTATACTGTCGGCCATGTGAC
CTCGCCAGCACTGATTCCATACGAGCCTTCGTAGAAAGGTTCAAGAAAGAAGAACCATAC
GTAGACATCCTGGTGAACAATGCGGGGGTCATGGAGGCGCCGGCGAGGGTCACACTGGAC
GGGTTCGAGACACATTTAGGAGTCAACCACATGGGACACTTCCTGCTCACCAACCTGTTA
CTCGATACACTTAAGCAATCGGCGCCGAGCCGCGTCATATTGGTGACCTGCAGCGCACAC
AGTAAGGGTCAGATTCACAAAGAGGATCTCAACATGACCGCCAAATACGACCCCGCGGCC
GCCTACAACCAGAGCAAACTGGCTAACGTGCTGTTCGCGAGAGAACTCGGGAGGCGGATG
CTTAACACCGGCGTGTCTGTGATAGCCGTGGACCCGGGGTTCTCGGATACGGACCTCACT
CGTAACATGGCCATGATGAAGAGCGTCACGAGGTTCCTCGTGTACCCGCTGTTCTGGCCC
GTCATGAAGAGAGCCATGACCGGCGCTCAGGTCATCCTGCACGCGGCCCTGGACCCAGCC
CTGGACGGCTCGGCGGGGGACTACTATGTGGACATGAAAAAGACCAACCCATCAGAATTA
GCTCAGGATTACGAGCTGGCGCTGTGGATGTGGAAGGTCAGTCAGAAGTGGACCAAAGTC
GCCGAGCACGCGGCGGCGCTGGCGGCCACTTAG
Protein sequence:
MWVPNLPVTVLTGLAAGAGVICIFKDIYGGPPFDKKVLADGKTVILTGATSGIGSKAAWD
FAKRGAKVFMACRDMKKCEEVRREIVLDTGNKFVYCRPCDLASTDSIRAFVERFKKEEPY
VDILVNNAGVMEAPARVTLDGFETHLGVNHMGHFLLTNLLLDTLKQSAPSRVILVTCSAH
SKGQIHKEDLNMTAKYDPAAAYNQSKLANVLFARELGRRMLNTGVSVIAVDPGFSDTDLT
RNMAMMKSVTRFLVYPLFWPVMKRAMTGAQVILHAALDPALDGSAGDYYVDMKKTNPSEL
AQDYELALWMWKVSQKWTKVAEHAAALAAT