New model in OGS2.0 | DPOGS215098  |
---|---|
Genomic Position | scaffold6828:- 108-4810 |
See gene structure | |
CDS Length | 1434 |
Paired RNAseq reads   | 105 |
Single RNAseq reads   | 317 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009588 (8e-31) |
Best Drosophila hit   | ND |
Best Human hit | serine/threonine-protein kinase ATR (4e-07) |
Best NR hit (blastp)   | conserved unknown protein [Ectocarpus siliculosus] (3e-09) |
Best NR hit (blastx)   | conserved unknown protein [Ectocarpus siliculosus] (1e-08) |
GeneOntology terms   | ND |
InterPro families    | IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic IPR011009 Protein kinase-like domain |
Orthology group | MCL22687 |
Nucleotide sequence:
ATGCTGTCAATCTGTGAGACGATCTCCTATCAAAGCTCTCCATCAACAGACGTTGTTCTT
GACAAATTGGACTCCTTCGATCAAATCCTTGATGAGAATGTCTCCCAGAGCATACTTAAC
ACGCTGCAACCCCTCCTGAGCACAATGGACCAGTATTCCGTGGACCAGTTGCTGTCCAAG
CGCGAGCTGTTCTCTCCTCACCCCGCGCTGCTCGAGGAGGTAGTTTTGGTCGAGTCGAGT
GACAAATATAAGCAGTGTCTGAGCTTAGTCGCTGACCCTGTGTATTTGCTGAAACAATAC
ATAAGAATGATGCTAGTAGCCGTGCAAACAGACGATGTAACGAAATACAAACAGATATAC
AAAAATATGAGACAGAGGATTTTTGAGAATCCGTACGTCGGCGCCGATTACATCGTCCTC
AACAAGTACAGTAAGCAACTGGAAGGCTGTGACGATTTTGGTGAGACTAATTCATTATTA
GGATCCGGATACCGATCCGCGACTCCCGGGATTTTGAATAGAGACGAAACTCCTCATCAT
TCCATGGGCTCACCGTGCTGGTGCCGGGTCCATCGTTGCAGGGAAAGGAGCTTCAACTGT
GCCTGGGACTGGCGACCCAGGTGTAGGAGTCGGGCACTCGACAGACTGCTGGCTCTCAAG
GACGGAGTCCACTTCATTAAATTCATGGAAAATGTGTCCGTATACCGTGACGCGGTGACC
CGGCCGGTGTTACTGAGCTATTTGTCGTCAGACGGATTCACACGTCGTTGTATAGTGAAG
ACAGAGGGTAAGGGACATGCGGCTGCGGTCAGGGTCCGGGGGGCCTTGGAGAAGGCCTGG
GAGATCCCACGGGGATATAAGGTGACGCCGCTCACATCCGACTGTCTTCTGATCGAGTAC
GTGGAGAATAACACGCGACTCCGGGACATGGTGGACACCGGCGGTGGGGATGCCGGCGTC
ACTCGGACCGCTGACGAGAATCTCATACTAAACGTACCTCAAGCTATTTCCCAGTTGGAG
TCCCTAGCAAAGAGCGTGCCTTCCACTTCACTACGATCAACCATTGAGTCGGGGTGTCTC
ACCTTGGAAGAGTTCATAGGGAAGAAGACGGCCTTCACCGAGTCCCTGGGTCATATGACA
GCATTCAGCTTTATATGTGGTCTGTCAGACCGTCATTTACAGAACATCCTGTATGACCCG
GTCCGAGGCACCGTCTGCGCTGTGGACTGCGGAGCCCTACAGCCCCAGGAGATACCGCCC
GCTAGACTCACGAGGAACCTGCTGGCGGTCTGTCGTACCGACGTTCTCGAAGCTCGACTC
CAAAGAATGTTGTCCAGACTACGGGAATATCAAGGAATAATACTCCCAGCAGTAAATATA
TCGCTCAAGAGATCTGGACACCTGGATAAGGTGAGTGAACCCCCTGTGTATTAG
Protein sequence:
MLSICETISYQSSPSTDVVLDKLDSFDQILDENVSQSILNTLQPLLSTMDQYSVDQLLSK
RELFSPHPALLEEVVLVESSDKYKQCLSLVADPVYLLKQYIRMMLVAVQTDDVTKYKQIY
KNMRQRIFENPYVGADYIVLNKYSKQLEGCDDFGETNSLLGSGYRSATPGILNRDETPHH
SMGSPCWCRVHRCRERSFNCAWDWRPRCRSRALDRLLALKDGVHFIKFMENVSVYRDAVT
RPVLLSYLSSDGFTRRCIVKTEGKGHAAAVRVRGALEKAWEIPRGYKVTPLTSDCLLIEY
VENNTRLRDMVDTGGGDAGVTRTADENLILNVPQAISQLESLAKSVPSTSLRSTIESGCL
TLEEFIGKKTAFTESLGHMTAFSFICGLSDRHLQNILYDPVRGTVCAVDCGALQPQEIPP
ARLTRNLLAVCRTDVLEARLQRMLSRLREYQGIILPAVNISLKRSGHLDKVSEPPVY