New model in OGS2.0 | DPOGS215454  |
---|---|
Genomic Position | scaffold478:- 78220-92812 |
See gene structure | |
CDS Length | 3873 |
Paired RNAseq reads   | 2429 |
Single RNAseq reads   | 5697 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007486 (2e-33) |
Best Drosophila hit   | CG32350 (8e-37) |
Best Human hit | vacuolar protein sorting-associated protein 11 homolog (5e-149) |
Best NR hit (blastp)   | PREDICTED: similar to Vacuolar protein sorting 11 [Apis mellifera] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to Vacuolar protein sorting 11 [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0008270 zinc ion binding GO:0005488 binding GO:0005515 protein binding GO:0046872 metal ion binding |
InterPro families    | IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001841 Zinc finger, RING-type IPR003859 Galactosyltransferase, metazoa IPR011046 WD40 repeat-like-containing domain |
Orthology group | MCL15466 |
Nucleotide sequence:
ATGGCAACACTTAAGGACGTGCGTAAGCCCACTGCTAGCTGCCGTGGTAAACCCATCAGT
GGAGGTGTTTCTCGCCACGAGATACGTCGCAGATACCACGGGGGCGCTGGGGAGCAGCTT
AATGTCAGCAAATATAAATATGGCCCTCCAGTGACTGTTGATATCCCAGAAAATGTAAAA
ACACTTTACAACTTAATAATTTGCTGTGGAACGGAAAAGCAGCAGGTAGATGAAGTGGAA
TTTAAAAAAGAAGATAATGTTATCAATTTGAAAGCATTGGATTTTAAGTATGATTCTTAT
TTTGAGACAAACGTCGACCAATACTTTGATAGGCCATGTCCGTTTATATCACCTGGCCTT
GGCCCCGTGGCCGAAGACAGATCGTTTAAGAGTCTCTTGCTCATGGAAGACGTTCACTTG
CGGATACAACCCGGTGGAATCCACATACCCATTGAATGTATTGCGATACAAAAAGTAGCA
ATTGTCGTGCCGATTGACGAAACACTGCCATTTGGAGGAGCCGTTGCCATGAGACCCAAA
CATTTTATAAAAGTCAACGGATTTTCTAACAAAGCCTGGTCAAACGACGGTGACTTCATC
GACATGTACAAAAGATTGGTAGCAGCCAACTTTAGCATCGAAGGAAACACACCTACAATT
GGAAGTTATTACTTTTTCAAAAATCTACGTCAAGAAAATCATGAACCCGTAAAGAACCTA
ACGATTCCAACGAATTATTCAAAAGATGGTCTCTCTAATGTTGTATATGAAATAAAAGAT
TGCATGCAATTAAAACAGCTTTATACGCTCATTAAAGTTGAATGGCGTCGTTTCACTTTT
TTTGATGTTCACAACAACCTGGACAATGGAAAGATTGCTGAGTGCTTGCAGGATACCAAT
GTAACAGTGGCTACGAGTGGCCACAACCACGTAATACTCTGTGATGTGACAGGGTGGGCT
CATCTGATATCCCGCTCCTGGGAGATAATGTCATTCAAAGCTTACGAGATGACCGTCCTA
TTAGCGCAACAGCTACCACACGATCCATTCTTAGTAACTATTGGAGAAGATGAGTCCGGT
GTCACACCTTTGATTAAAGTGTGGGACTGGTCGAGGGTGGACCGTCATGGGAACCCTCAA
TGTGTTCGAACTGCCCGTGCTATGCCGTCTCATGGACACAATGTACAAACTACCGCTCTA
GCTGTGCATGACAATAAGAATCTCCTAGCCGTTGGTTTCCAAGATGGTTCAGTGACCTTA
TATCGTGGAGAGATATCAAGACAGCGTGGAATCAAAATGAAAACATTACCAGACACCGGA
TCCAGTCCTATAACTGGACTGGCTTTCAAAGGTGCTGATAAGTTGTTCGTGGTGTCTCGT
TCCTGTGTAATGGTGTGCTGGTTGACCAGCGACCGTAGTGTGGTTCTGGACGCCATGGGA
GCAGCACCAGGGTGCTCAGTGCTAGCAAACTCACATAGACTGACGGTTGCCGCACCGGAT
GCTATTTACTGCTATACTACCGAGGGTCGTGGTCCATGCTATGCTCTGGAGGGGGAGAAA
GTCAGGTTGAACTGGTTCCGCAGCTACCTGGTGATAGTCACCAACGCCACCGGTTCAGCA
AACACACCGAAATCCCATCACATCACGATATTGGACATTCAGAACAAATTCATAGTATTC
TCTAAGACGTTCGAAGAAATCGATGCCGTCCTGACAGAATGGGGATCCTTTTACATTCTC
CAGAAGAATAAGGAGATGATATTTTTGGAGGAGAAGGATCTTCAATCGAAGTTACTGTTG
CTCTTCAAGAAGAACCTGTACGATGTAGCCATTAGGATAGCGAGCAGCCAACACTACGAC
GTAGAGGGGTTGACTGAAATATACAAGAATTACGGAGACCATTTGTATAGTAAGGGTGAC
CTTAAAGGGGCGATAGATCAATATGTGAAGACGATAGGCTGGTTGGAAACGTCATACGTT
ATACGCAAATACCTCGAATCCCGCCACCTGGAACCCTTGGTGCTGTATTTGGAGGAACTG
CATAAGAAGGGTTACGCCACCGAAGACCACACCACGTTGCTGCTGACGTGTTACGTGAAA
ATCGACCAACACGACCAACAGGGGAAATTGAAGGAATTCATCAACTCCAAGGATAAGGCC
ATCGACTTCGACGTAGATGTTGCTATCAAGGTCGTCCGTCAAGTGAGTGCCACAGACGCG
TTGTCACTAGCTTACAACTACAAGCGTCACGACTGGTACCTGAAAATAGTGACAGAGGAT
AAGAAAGATTACAAACAGGCTCTGGACTATATATCGGAACTAGAGTTTGAAGACGCCGAG
ATGTACATGAAGAAGTACGGACACAAACTGATACAACACGTCCCCGGAGATAGCACCGAG
CTGTTGAAATTACTGTGTACAGACTACAAACCTCGCAGTAAACCGTTAGTAGATGAGAGC
ACTTTATCCGGTAACCTGCGAGAACCCGACAGAGCTGTACCCGATGATTTCATACACATG
TTCCTGAGCAATTCTGAGCGTCTCATAGACTTCCTTGAGCATATGGTGACCAAGGACACT
CAATGCTCGAGTCTCGTCTACAATGCTCTAATTGAGCATTATATACACGTCTGGGCCAAA
TCGTCTGAAGCGGACAAGAGGATTTACGAGCAGAAAGTACTCGATATCATCAAAGACCCC
GAAGCCAAATACGACAAAGATCAGACGCTCATTATTTGCCAAATGCTGGGATTCAAGAGT
GGCATCCTCCAACTATACGAGGAGAAAAGACTATGGCGTGCTCAGATATCTCTCCACCTC
CGTACACCGGGCGGCACAGAGCGCGCGCTCGGAGTGTGTCGTCGTCGCGGAGGGAGTGCG
CCGCGTTTGTGGCTGGACGTACTATGGGCACCTCCACCACCAGATTACCTTCCAGAACTG
CTCAGAGTCGTGGCTGCCGAAAAACTGTTATCACCCATCCTGGTCATCGATTGCCTGGCG
AGTACACCGACCTACACACTCGGAGATGTCCGCAAGTACCTGACGGACGTTTTGAAGTCT
GAGGACGAAGTGATCACTAGAGAACAGGAACTGGCAGCGAAATACAAGAAGGAGATAGAA
GAGATGAAGACTCAGATACACAACATACAGAACGAACCTATCACGTTCCAGAGGAGCCTG
TGCGCGGCCTGCAGCAGGCCGCTCGAGTTGCCCACCGTACACTTCATGTGTCAGCACTCC
TTCCACAAGGACTGTTTCGAGACGTATTCGGAGTCGGAGCGCCAGTGCGTGGCGTGTTCC
CCGACGCTTCGCCCCGCGCCCGCGCCGCCCGCCGACCAGCTGCACTCACGACTACACGCA
GACACCGACCCCGTATTATATGTGGTGACTGAGGCGCCGGAGCCCGTACCCTTCAATGTA
CCCTCAACTGTACCTTACGTACCATCCGTTGTGACTGTACCCTCCGCACCTGTCCCAACT
TACGGACCGGGCGCTGAAGCGAAGCTCAGGCTGCAGGAGGGACAAAGCAAACAAGTCTAT
GTCCAGAACGCTTTGAAGCAAATACCTCCGAAGGGCACGGCGGTGATTCCCGTACCGGAA
GGCAGGATGCGTCTCCTGGAACAGCATCAGTACAGTTCCAGCCTGGAAGCCAATATGAGC
AAACTGGAACCCTTAGTCCACAGATCCCCTCAACAGTCCCCAAACACCTCCCGGACGAAA
CCTCCACAGAAAATATCCTCAGCGATCATCGATAGCAAAAATCCCTTCGACACATACGAC
GAGTCGAAGAATCCCTTCGCAGACGAAGACAACGATCCCACGAACCCCTTCGCCGAAGAC
GACTATGATAAAAATTTAAATCCATTCGCCTGA
Protein sequence:
MATLKDVRKPTASCRGKPISGGVSRHEIRRRYHGGAGEQLNVSKYKYGPPVTVDIPENVK
TLYNLIICCGTEKQQVDEVEFKKEDNVINLKALDFKYDSYFETNVDQYFDRPCPFISPGL
GPVAEDRSFKSLLLMEDVHLRIQPGGIHIPIECIAIQKVAIVVPIDETLPFGGAVAMRPK
HFIKVNGFSNKAWSNDGDFIDMYKRLVAANFSIEGNTPTIGSYYFFKNLRQENHEPVKNL
TIPTNYSKDGLSNVVYEIKDCMQLKQLYTLIKVEWRRFTFFDVHNNLDNGKIAECLQDTN
VTVATSGHNHVILCDVTGWAHLISRSWEIMSFKAYEMTVLLAQQLPHDPFLVTIGEDESG
VTPLIKVWDWSRVDRHGNPQCVRTARAMPSHGHNVQTTALAVHDNKNLLAVGFQDGSVTL
YRGEISRQRGIKMKTLPDTGSSPITGLAFKGADKLFVVSRSCVMVCWLTSDRSVVLDAMG
AAPGCSVLANSHRLTVAAPDAIYCYTTEGRGPCYALEGEKVRLNWFRSYLVIVTNATGSA
NTPKSHHITILDIQNKFIVFSKTFEEIDAVLTEWGSFYILQKNKEMIFLEEKDLQSKLLL
LFKKNLYDVAIRIASSQHYDVEGLTEIYKNYGDHLYSKGDLKGAIDQYVKTIGWLETSYV
IRKYLESRHLEPLVLYLEELHKKGYATEDHTTLLLTCYVKIDQHDQQGKLKEFINSKDKA
IDFDVDVAIKVVRQVSATDALSLAYNYKRHDWYLKIVTEDKKDYKQALDYISELEFEDAE
MYMKKYGHKLIQHVPGDSTELLKLLCTDYKPRSKPLVDESTLSGNLREPDRAVPDDFIHM
FLSNSERLIDFLEHMVTKDTQCSSLVYNALIEHYIHVWAKSSEADKRIYEQKVLDIIKDP
EAKYDKDQTLIICQMLGFKSGILQLYEEKRLWRAQISLHLRTPGGTERALGVCRRRGGSA
PRLWLDVLWAPPPPDYLPELLRVVAAEKLLSPILVIDCLASTPTYTLGDVRKYLTDVLKS
EDEVITREQELAAKYKKEIEEMKTQIHNIQNEPITFQRSLCAACSRPLELPTVHFMCQHS
FHKDCFETYSESERQCVACSPTLRPAPAPPADQLHSRLHADTDPVLYVVTEAPEPVPFNV
PSTVPYVPSVVTVPSAPVPTYGPGAEAKLRLQEGQSKQVYVQNALKQIPPKGTAVIPVPE
GRMRLLEQHQYSSSLEANMSKLEPLVHRSPQQSPNTSRTKPPQKISSAIIDSKNPFDTYD
ESKNPFADEDNDPTNPFAEDDYDKNLNPFA