| New model in OGS2.0 | DPOGS201574 |
|---|---|
| Genomic Position | scaffold7569:+ 10466-16171 |
| See gene structure | |
| CDS Length | 1032 |
| Paired RNAseq reads | 1282 |
| Single RNAseq reads | 3365 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006121 (1e-74) |
| Best Drosophila hit | dynein light intermediate chain, isoform C (1e-117) |
| Best Human hit | cytoplasmic dynein 1 light intermediate chain 2 (9e-91) |
| Best NR hit (blastp) | PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] (2e-150) |
| Best NR hit (blastx) | PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] (8e-137) |
| GeneOntology terms | GO:0003774 motor activity GO:0005868 cytoplasmic dynein complex GO:0005875 microtubule associated complex GO:0030286 dynein complex GO:0007018 microtubule-based movement GO:0042623 ATPase activity, coupled GO:0048813 dendrite morphogenesis GO:0007052 mitotic spindle organization GO:0008088 axon cargo transport GO:0048814 regulation of dendrite morphogenesis GO:0000226 microtubule cytoskeleton organization GO:0048477 oogenesis |
| InterPro families | IPR008467 Dynein 1 light intermediate chain IPR022780 Dynein family light intermediate chain |
| Orthology group | MCL11753 |
Nucleotide sequence:
ATGGAGACAAACGGCCAAGCTAATGGGCTTAAGTCTAAAAAGAAAGATGACGCAGATTCG
AAGGATAATTTGTGGTCTGCTATACTAGAGGAGGTTCAAAATCAGGGGAATACTAAATTA
CCTTCCAATAAGAACGTGCTAGTTCTGGGCGACAACGAAACTGGGAAGACAACTCTCATA
GCTAAGTTACAGGGGGTTGAAGACCCTAAAAAAGGATCAGCTCTTGAATATGCATTCATA
GATGTTAGAGATGAGTACCGTGATGACCACACTAGGCTCAGTGTATGGGTACTCGACGGA
GATCCAGGTCACACAAATCTGCTCAAGTTTGCCCTTAACGAAGAAACATTCCCCCACACA
TTAGTGATGCTCACAGTGGCAATGACAACGCCATGGGGTATACTAGATCAGTTACAAAGC
TGGGCGTCTGTGCTCGGTGATCACATAGACAAATTGGATCTCACCCCCGAACAAAGGTTA
CAAAGTAAGAAGCAGCAGGTACAGAAGTGGCAGAGGTATACGGAGCCGGGCGACGAGCTC
GAGGCCAACGCCTCGTCCCCGATGAAGCGTTCCTCCCGCAACCTGTCCGACGACCTGGAC
AGCGACGATGAAGACAACCAGCTGCCCGAGGCTGTGCTCACAACTAACCTTGGCCTGGAC
ATCGTGGTTGTTGCCACTAAGACTGACTACATGAGTACCCTGGAGAAGGAGCACGACTAT
CGCGACGAGCATTTCGACTTCATGCAGCAGTGGATCCGTCGGTTCTGTCTCCAATACGGA
GCGGCGTTATTCTACACCAGCTCCAAAGAGGACAAGAACTGCGACCTGCTCTACAAATAT
CTCACACACCGGATATACGGTCTGCCATTCAGGACGCCGGCGCTCATAGTGGAGAAAGAT
GCTGTGCTCATACCGGCGGGTTGGGACAGCATGAAGAAGATCAGTATCCTGTACGAGAAC
ATGCAGACGTGCCAGCCCGACGACTACTACAGAGACGCGATCGTGCAACCCGCTACCAGG
AAGGTTGGTTGA
Protein sequence:
METNGQANGLKSKKKDDADSKDNLWSAILEEVQNQGNTKLPSNKNVLVLGDNETGKTTLI
AKLQGVEDPKKGSALEYAFIDVRDEYRDDHTRLSVWVLDGDPGHTNLLKFALNEETFPHT
LVMLTVAMTTPWGILDQLQSWASVLGDHIDKLDLTPEQRLQSKKQQVQKWQRYTEPGDEL
EANASSPMKRSSRNLSDDLDSDDEDNQLPEAVLTTNLGLDIVVVATKTDYMSTLEKEHDY
RDEHFDFMQQWIRRFCLQYGAALFYTSSKEDKNCDLLYKYLTHRIYGLPFRTPALIVEKD
AVLIPAGWDSMKKISILYENMQTCQPDDYYRDAIVQPATRKVG