| New model in OGS2.0 | DPOGS203183 |
|---|---|
| Genomic Position | scaffold4369:+ 6268-9454 |
| See gene structure | |
| CDS Length | 792 |
| Paired RNAseq reads | 57040 |
| Single RNAseq reads | 127067 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011416 (2e-121) |
| Best Drosophila hit | ribosomal protein S3A, isoform A (8e-96) |
| Best Human hit | 40S ribosomal protein S3a (8e-90) |
| Best NR hit (blastp) | s3a protein [Actias selene] (9e-138) |
| Best NR hit (blastx) | ribosomal protein S3A [Heliconius melpomene] (1e-120) |
| GeneOntology terms | GO:0003735 structural constituent of ribosome GO:0022627 cytosolic small ribosomal subunit GO:0006412 translation GO:0022626 cytosolic ribosome GO:0048477 oogenesis GO:0005811 lipid particle GO:0000022 mitotic spindle elongation GO:0007052 mitotic spindle organization |
| InterPro families | IPR018281 Ribosomal protein S3Ae, conserved site IPR001593 Ribosomal protein S3Ae |
| Orthology group | MCL11075 |
Nucleotide sequence:
ATGGCGGTCGGTAAAAATAAAGGCCTATCGAAAGGCGGTAAAAAGGGAGTTAAAAAGAAG
ATCGTCGACCCATTCACACGCAAAGACTGGTACGATGTCAAAGCACCGTCGATGTTCACC
AAGAGGCTGGTGGGAACCACGCTCGTCAACCGCACCCAGGGAACAAAAATCGCTTCTGAG
GGTCTGAAGGGCCGCGTCTTCGAGGTTTCCCTCGCTGATTTACAAGCTGACACAGATGCG
GAAAGGTCTTTCCGCAAGTTCCGCTTGATCGCTGAAGATGTCCAGGGACGTAATGTCCTC
TGTAACTTCCATGGCATGGATCTTACTACTGACAAGTTGAGATGGATGGTTAAGAAATGG
CAGACATTAGTTGAAGCCAACATTGATGTGAAGACCACCGACGGCTACCTCCTGAGGGTG
TTCTGCATCGGCTTCACTAACAAGGACTCGCTCAGTCAGAGGAAGACATGCTATGCTCAG
CACACCCAGGTCCGCGCCATCAGGAAGAAGATGTGCGAGATCATAACCCGTGATGTAGCG
GGATCTGAATTGAAGGAAGTTGTCAACAAACTGATCCCCGACTCCATCGCCAAGGATATT
GAAAAAGCCTGCCTCAGCATCTACCCGCTGAGGGATGTGTGCATCCGTAAGGTGAAAGTG
CTCAAACGTCCGAGGTTTGAGATTGCCAAGCTGATGGAGCTGCACGGAGAAGGCGGTGGC
AAGAGGGGAGAAGGAGGTGACAAGTCAGACAGACCTGAAGGGTACGAGCCACCCGTACAA
GAGAGCGTCTAA
Protein sequence:
MAVGKNKGLSKGGKKGVKKKIVDPFTRKDWYDVKAPSMFTKRLVGTTLVNRTQGTKIASE
GLKGRVFEVSLADLQADTDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKW
QTLVEANIDVKTTDGYLLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVA
GSELKEVVNKLIPDSIAKDIEKACLSIYPLRDVCIRKVKVLKRPRFEIAKLMELHGEGGG
KRGEGGDKSDRPEGYEPPVQESV