New model in OGS2.0 | DPOGS206415  |
---|---|
Genomic Position | scaffold5646:+ 149-11535 |
See gene structure | |
CDS Length | 1701 |
Paired RNAseq reads   | 248 |
Single RNAseq reads   | 587 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013851 (3e-167) |
Best Drosophila hit   | maleless, isoform C (2e-75) |
Best Human hit | putative ATP-dependent RNA helicase DHX30 isoform 2 (2e-92) |
Best NR hit (blastp)   | PREDICTED: hypothetical protein [Nasonia vitripennis] (1e-110) |
Best NR hit (blastx)   | PREDICTED: hypothetical protein [Nasonia vitripennis] (5e-106) |
GeneOntology terms    | GO:0005737 cytoplasm GO:0016787 hydrolase activity GO:0005739 mitochondrion GO:0004386 helicase activity GO:0000166 nucleotide binding GO:0003723 RNA binding GO:0005524 ATP binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008026 ATP-dependent helicase activity GO:0003676 nucleic acid binding GO:0008150 biological_process |
InterPro families    | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR007502 Helicase-associated domain |
Orthology group | MCL18044 |
Nucleotide sequence:
ATGTGTAAAGCATTTGTTACAGATTGTTCTGAAGACGTGTCAGAACAGGAGAACATAGCG
GATGAACTAACAGATACAAGAACAAACATACATCCAGTTTTCGGGAAACCGGTGAAGCCC
ACGGCACAAGCGTTAGCGAGACGCGAGCGAACACTGAGACACACATTCAAAAATTACGAC
GAAGAGTTAACACCGCTACCTATAGACGAGTATTCCAATGACATAACATCAGCGTTGGAT
GACAGTCGCGTGTTAGTAATAATTGGCGCTGCGGGGTGTGGAAAATCGACTAGAGCACCC
GTCGCAGTCCTAAGACAGCTCTGCGACAAAATGAACGCAATCGTGTCGCAGCCGCGACGT
GTCGCAGCTATCGGGCTTGCGCAACGCGTGTCTGACGAGTTAGGCGAAAAGGTCGGTGAA
ACTGTTGGTTATCAAGTCCGTTTGCAGTCTGTGCCACCCAGACCTCCCGGCGGCGCCATC
TTGTATTGCACTTCCGGTGTCTTATTAAAGAGGTTGCAGATGAATCCAGGTCTTGAAGGT
TGTACCCACGTGTTCATAGACGAAGCACACGAGAGAGATGTTAATACAGATATAACGCTG
TTGCTACTGAGACGGGCCTTGGACATAAATCGGCACCTGAAGGTGATCGTCATGAGCGCC
ACCCTCGATACAGGAGTCTTTACTAGATACTTCGACGACTGTCCGGTCATCCAGGTCCCC
GGGAGAACATTCCCGGTTGAAATTTCGCATTTACCAGATATAGAGAAAAGATTCAATATA
AGACTACCCTCAAGCTTGGAGAGCTGCAGAAAAGTTGGAAAGCCACAGATCAATTGCCAA
GAAATAGTCCAAGTCATTAAATCCATAGACAATACTTGTCCCGAGGGCGCCATTCTAGTG
TTCCTCCCCGGCTGGGCCGAAATCAAGCAAACTCAGCAGCTATTACAGGACCAGTACAAG
GATTCGCCTCTACACATGATATTCCCGGTACATTCAAGGCTATCAACATCAGAACAAACG
AAGATATTCTCAAAGTGCCTCGGTATCCGCAAGATAGTACTAGCCACTAACATAGCCGAG
ACATCTATAACAATACCTGACGTGGTTCACGTCATAGACAGCGGGATACACAGGGAGAAT
AGACTGCGAGATACTACTAATATCAGTAGCTTGGAAACAGTTTGGGCGTCTAAAGCTAGC
TGTACACAGAGAGCGGGGCGAGCGGGGCGTGTTAAACCCGGTCATTGTTACAAAATGTAT
ACCAAAGAAAAGGAAGAAGAATTCCAAGCTCACACTACTCCGGAGATATTGAGAGTCCCT
TTAGAACAAACTGTATTGGATTGTAAAACCTATGCCCCAGATGATAGAGTCGAAGATTTC
TTATCTCAACTCCCGGAACCGCCGAGCGATAAGGCGGTTCGATTTGCGGTCAATGACCTC
GTGGATTTGGGTGCGCTCACCCATAACCAAAAATTGACTCGCCTGGGCGCAATACTATCA
AGGGTCAGCATACACCCGCGTTTGTGTTTCAGCGTTTTAAACGCTGCGTTTATTGGAAAT
ATAATAGCGGGCGTGCGGACCGCTCTCGCCACCGAACAAGAGTTCTTCGAAGACTCCGGA
GATAGGAGGAACGGTGAGATGGGCGTGGATATTAAATTTAACCGACGTCGAATAATTGAT
GTTCTCAATCACAGAGTCTAG
Protein sequence:
MCKAFVTDCSEDVSEQENIADELTDTRTNIHPVFGKPVKPTAQALARRERTLRHTFKNYD
EELTPLPIDEYSNDITSALDDSRVLVIIGAAGCGKSTRAPVAVLRQLCDKMNAIVSQPRR
VAAIGLAQRVSDELGEKVGETVGYQVRLQSVPPRPPGGAILYCTSGVLLKRLQMNPGLEG
CTHVFIDEAHERDVNTDITLLLLRRALDINRHLKVIVMSATLDTGVFTRYFDDCPVIQVP
GRTFPVEISHLPDIEKRFNIRLPSSLESCRKVGKPQINCQEIVQVIKSIDNTCPEGAILV
FLPGWAEIKQTQQLLQDQYKDSPLHMIFPVHSRLSTSEQTKIFSKCLGIRKIVLATNIAE
TSITIPDVVHVIDSGIHRENRLRDTTNISSLETVWASKASCTQRAGRAGRVKPGHCYKMY
TKEKEEEFQAHTTPEILRVPLEQTVLDCKTYAPDDRVEDFLSQLPEPPSDKAVRFAVNDL
VDLGALTHNQKLTRLGAILSRVSIHPRLCFSVLNAAFIGNIIAGVRTALATEQEFFEDSG
DRRNGEMGVDIKFNRRRIIDVLNHRV