DPGLEAN09530 in OGS1.0

New model in OGS2.0DPOGS206415 
Genomic Positionscaffold5646:+ 149-11535
See gene structure
CDS Length1701
Paired RNAseq reads  248
Single RNAseq reads  587
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA013851 (3e-167)
Best Drosophila hit  maleless, isoform C (2e-75)
Best Human hitputative ATP-dependent RNA helicase DHX30 isoform 2 (2e-92)
Best NR hit (blastp)  PREDICTED: hypothetical protein [Nasonia vitripennis] (1e-110)
Best NR hit (blastx)  PREDICTED: hypothetical protein [Nasonia vitripennis] (5e-106)
GeneOntology terms










  
GO:0005737 cytoplasm
GO:0016787 hydrolase activity
GO:0005739 mitochondrion
GO:0004386 helicase activity
GO:0000166 nucleotide binding
GO:0003723 RNA binding
GO:0005524 ATP binding
GO:0005575 cellular_component
GO:0003674 molecular_function
GO:0008026 ATP-dependent helicase activity
GO:0003676 nucleic acid binding
GO:0008150 biological_process
InterPro families


  
IPR014001 DEAD-like helicase
IPR001650 Helicase, C-terminal
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR007502 Helicase-associated domain
Orthology groupMCL18044

Nucleotide sequence:

ATGTGTAAAGCATTTGTTACAGATTGTTCTGAAGACGTGTCAGAACAGGAGAACATAGCG
GATGAACTAACAGATACAAGAACAAACATACATCCAGTTTTCGGGAAACCGGTGAAGCCC
ACGGCACAAGCGTTAGCGAGACGCGAGCGAACACTGAGACACACATTCAAAAATTACGAC
GAAGAGTTAACACCGCTACCTATAGACGAGTATTCCAATGACATAACATCAGCGTTGGAT
GACAGTCGCGTGTTAGTAATAATTGGCGCTGCGGGGTGTGGAAAATCGACTAGAGCACCC
GTCGCAGTCCTAAGACAGCTCTGCGACAAAATGAACGCAATCGTGTCGCAGCCGCGACGT
GTCGCAGCTATCGGGCTTGCGCAACGCGTGTCTGACGAGTTAGGCGAAAAGGTCGGTGAA
ACTGTTGGTTATCAAGTCCGTTTGCAGTCTGTGCCACCCAGACCTCCCGGCGGCGCCATC
TTGTATTGCACTTCCGGTGTCTTATTAAAGAGGTTGCAGATGAATCCAGGTCTTGAAGGT
TGTACCCACGTGTTCATAGACGAAGCACACGAGAGAGATGTTAATACAGATATAACGCTG
TTGCTACTGAGACGGGCCTTGGACATAAATCGGCACCTGAAGGTGATCGTCATGAGCGCC
ACCCTCGATACAGGAGTCTTTACTAGATACTTCGACGACTGTCCGGTCATCCAGGTCCCC
GGGAGAACATTCCCGGTTGAAATTTCGCATTTACCAGATATAGAGAAAAGATTCAATATA
AGACTACCCTCAAGCTTGGAGAGCTGCAGAAAAGTTGGAAAGCCACAGATCAATTGCCAA
GAAATAGTCCAAGTCATTAAATCCATAGACAATACTTGTCCCGAGGGCGCCATTCTAGTG
TTCCTCCCCGGCTGGGCCGAAATCAAGCAAACTCAGCAGCTATTACAGGACCAGTACAAG
GATTCGCCTCTACACATGATATTCCCGGTACATTCAAGGCTATCAACATCAGAACAAACG
AAGATATTCTCAAAGTGCCTCGGTATCCGCAAGATAGTACTAGCCACTAACATAGCCGAG
ACATCTATAACAATACCTGACGTGGTTCACGTCATAGACAGCGGGATACACAGGGAGAAT
AGACTGCGAGATACTACTAATATCAGTAGCTTGGAAACAGTTTGGGCGTCTAAAGCTAGC
TGTACACAGAGAGCGGGGCGAGCGGGGCGTGTTAAACCCGGTCATTGTTACAAAATGTAT
ACCAAAGAAAAGGAAGAAGAATTCCAAGCTCACACTACTCCGGAGATATTGAGAGTCCCT
TTAGAACAAACTGTATTGGATTGTAAAACCTATGCCCCAGATGATAGAGTCGAAGATTTC
TTATCTCAACTCCCGGAACCGCCGAGCGATAAGGCGGTTCGATTTGCGGTCAATGACCTC
GTGGATTTGGGTGCGCTCACCCATAACCAAAAATTGACTCGCCTGGGCGCAATACTATCA
AGGGTCAGCATACACCCGCGTTTGTGTTTCAGCGTTTTAAACGCTGCGTTTATTGGAAAT
ATAATAGCGGGCGTGCGGACCGCTCTCGCCACCGAACAAGAGTTCTTCGAAGACTCCGGA
GATAGGAGGAACGGTGAGATGGGCGTGGATATTAAATTTAACCGACGTCGAATAATTGAT
GTTCTCAATCACAGAGTCTAG

Protein sequence:

MCKAFVTDCSEDVSEQENIADELTDTRTNIHPVFGKPVKPTAQALARRERTLRHTFKNYD
EELTPLPIDEYSNDITSALDDSRVLVIIGAAGCGKSTRAPVAVLRQLCDKMNAIVSQPRR
VAAIGLAQRVSDELGEKVGETVGYQVRLQSVPPRPPGGAILYCTSGVLLKRLQMNPGLEG
CTHVFIDEAHERDVNTDITLLLLRRALDINRHLKVIVMSATLDTGVFTRYFDDCPVIQVP
GRTFPVEISHLPDIEKRFNIRLPSSLESCRKVGKPQINCQEIVQVIKSIDNTCPEGAILV
FLPGWAEIKQTQQLLQDQYKDSPLHMIFPVHSRLSTSEQTKIFSKCLGIRKIVLATNIAE
TSITIPDVVHVIDSGIHRENRLRDTTNISSLETVWASKASCTQRAGRAGRVKPGHCYKMY
TKEKEEEFQAHTTPEILRVPLEQTVLDCKTYAPDDRVEDFLSQLPEPPSDKAVRFAVNDL
VDLGALTHNQKLTRLGAILSRVSIHPRLCFSVLNAAFIGNIIAGVRTALATEQEFFEDSG
DRRNGEMGVDIKFNRRRIIDVLNHRV