New model in OGS2.0 | DPOGS208066  |
---|---|
Genomic Position | scaffold2468:- 8483-17597 |
See gene structure | |
CDS Length | 3882 |
Paired RNAseq reads   | 4132 |
Single RNAseq reads   | 11448 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007735 (5e-07) |
Best Drosophila hit   | CG5789 (0.0) |
Best Human hit | multidrug resistance-associated protein 4 isoform 1 (0.0) |
Best NR hit (blastp)   | ABC transporter family C protein ABCC2 [Heliothis virescens] (0.0) |
Best NR hit (blastx)   | ABC transporter family C protein ABCC2 [Heliothis virescens] (0.0) |
GeneOntology terms    | GO:0005215 transporter activity GO:0042626 ATPase activity, coupled to transmembrane movement of substances GO:0008559 xenobiotic-transporting ATPase activity GO:0043190 ATP-binding cassette (ABC) transporter complex GO:0055085 transmembrane transport GO:0005524 ATP binding GO:0016021 integral to membrane |
InterPro families    | IPR017871 ABC transporter, conserved site IPR003593 ATPase, AAA+ type, core IPR003439 ABC transporter-like IPR017940 ABC transporter, integral membrane type 1 IPR001140 ABC transporter, transmembrane domain IPR011527 ABC transporter, transmembrane domain, type 1 |
Orthology group | MCL10006 |
Nucleotide sequence:
ATGACTAAAACATTTTGGTTAAGCTACGCACCTTCCGGAGTCATGTTCCTTATACAAGCT
CTCATACTCAAGCCGTTCCAGCCTGTTGCCTTGAGTATACTGTTGACATACTGGGAGCCT
GGTTCAAATATGACGTACGATCAAGCGGTGTACTGCGCTTTCACCGTAATACTGATGTCT
CTACTGATAGCATTCCTCAACCACCATGGCACTTACTCTACTCAACAGTTTGGAATGAAA
GTCCGTATTGCCGCCTGCTCCCTTATCTATAGAAAGGTGATGCGGATGAGCTCCGGCGCG
CTAGCCCAAACAACTGCCGGTCAAGTAGTAAATCTGTTGTCCAATGATGTCAATCGATTT
GACTACGCTTTCATTTACACTCACTTCATCTGGCTTTTGCCACTCCAAGTGATAATTGTC
TGTTACCTCATATACATCAAAATTGGGTATGCAGCGATTGTTGGAGTCATTGGCATCGTC
TTGCAAACAATTCCTGTACAATCTTATATGAGCAAATTGGCAGCGAGACTGCGAATGAAA
ACAGCATCTAGAACTGACGAACGTGTCCGAATTATGGATGAAATAATAAGCGGAATGCAG
GTCATCAAAATGTACGCTTGGGAGAAACCGTTCGAGCAGGTTGTGGCATTGGCTCGTAAA
AATGAAATCAACTGCATTACATCAGCGTCTTATCTTCGAGGAGTTTACCTTAGCTTTATG
GTGTTCACTGAACGGCTAACACTTTATATCACCCTTTTATCCTATTCACTATTTGGATTT
CAAGTTACCGCTGACATTGTTTTTCCATTGGCGCAATTCTTCAATACCCTTCAAGGCACA
CTGTCAATTATCATGTCAAATGCCGTATCATTTTTAGCTGAAGCATTGATTTCAGTTCAA
CGACTTGAGGCGTTCATGTTATTGGATGAAAGGGAAGATCTTCGAAGTGTAGCGGGTGTA
GACATTGCAAAACTTGTTGCCAGTGTTGAAAAGAAAAATAAAAATCTTCGAGAAATTGAC
CTTTGTGCAAATAAATTCAAAAAAATTGATGAAGAAGGAATTTACAATCCAGGTTTTGAT
TGCGACGAAAAAGGTTTGATGACTCCAGCGATAAGTACGACTCCTATCAGCAATGATGTT
GGCATACTTATACAGAATGTGAGCGCTAGCTGGACCGAAGATGGTCCTATTACCTTGCGC
AATATTAATATTACAGTTCCTAAAGGGAAACTATGTGCTATAATTGGATCAGTAGGATCA
GGAAAGAGTTCTATTTTACAACTTTTGCTAAATGAATTACGCTCCAGTGCTGGACGGATA
CACCTCTGCGGGCCCCTTTCATATGCTAGCCAAGAACCTTGGTTATTTGTGGCAACAGTC
CGTCAAAATATTTTATTCGGTTTGCCATATAATCCGAAAAAATATAAGGAAGTAGTCAGA
GTATGTGCACTGCAGAAGGACTTTCTCCAATTCCCCCACGGAGATCAAACTCTTGTCGGA
GAAAGAGGTGCCTCTTTATCTGGAGGGCAAAGAGCCCGTATAAATCTAGCAAGAGCTGTA
TACCGCCAGGCGGATGTTTATCTACTGGATGATCCATTGTCTGCAGTAGATGCACACGTT
GGTCGACAACTCTTCGATGAGTGCATAACGGGTTATTTAAGGCACACCACTAGAGTTCTT
GTTACTCATCAACTTCACTACCTTAAAGTCGCTGATTACATTGTTATCATGAATAATGGC
ATCATTGAAGCAAAAGGAACCTATGAGGAATTACTTACTTCGGGTAAAGACTTTGCTAAG
TTGTTGTGCTCCGTTCAGGAAGATGATAATACGGAGGCTGAAAAGCCACTACCGATATCA
CGAAGGACTTCAGCAAGGCTATCCACGACAAGGAGGCCCTCGCTGGCAGAATCTACCACA
GGCTGTGATATTCCTGCTCAAGAGATGGAAGAAGAAGAAAGAGAATCTGGCTCAATGGGA
TGGCATGTATACGGAGCTTATTTGAAAGCTGGAGGTCGTACCGCCAGAATAGTTTTCATG
GTTTTACTTTTAGTAATAGGACAACTTTCTGCTACTCTCTGTGATTATTGGGTTACTTTC
TGGACGAATGAAGTTACCCTTCTTAAAGAAAGACAATCAAATGTGACTAAGGATTATGAA
CAAGATATAAAACCAGTAAATTCTACATTCAGCCTAAATAGTTACTTCTCTGGAATTAAA
GCTACACCAAATTTAAATATTCACGCCTACATTGGACCGTTAGACACATCGCAATATCTT
TATGTATATACAGCACTTATTGTTTGTTGTATCTTCTTTATCACGGCCCGAGCATTCATG
TTCTTCAAGGTTTGCATGACAGCCTCTAGGAACCTCCACAACGACATGTTCCATGCTATG
CTACGTGGGGTTATGAGATTCTTCGATATGAATTCGTCAGGTCGTATTCTCAACCGCTTC
TCAAAAGATATTGGTGCCTTAGACGAACTGCTGCCGCGTTTTCTTCTCGAATGCATACAA
ATCTACCTCGTGATGTTCAGTATTCTCACGTTGAATGCTGCTGCACTCGTCTGGACTTTA
TTGCCTACGACTATCATCTTACTACTCTTCTATGTTATTCTTCAGATATACTTAAAATCA
GCTCAATCTATTAAAAGATTAGAGGGGACAACGAGAAGTCCAGTCTTTTCACACATGTCG
GCCACCCTCAATGGCATCAGCACTATTAGATCCTCAGGAGCACAACAACGTTTAATACAA
GAATTCGATCATTTCCAAGACATTCACACGTCTACTTGGAGCAGCTACCTTGCGAGCGGC
GTAACTCTAGGATTCTGGCTTGACTTTATTTGTGTGATCTACCTTGCAATTGTCATTGTG
GCTTTCCTTGTTATAGATAGCAAAACCATTTTCTCCGGTAACGTGGGACTTGCGATATCA
CAAACTCTTATCTTGACCGGTATGCTGCAATTCGGTGTACGACAAACAGCTGAAGTTATC
TCACAAATGACCAGCGTTGAGCGCATCCTGCAATACACTAATATTGAAAAGGAATCGCAA
TGGGAGAAAGGAGCTAAAGAAACCCCTAAAGGATGGCCTTGGAGGGGTCGCATAGAGTTC
CGTAATTGCTATATGAAGTACACACCTGAAGATTTACCTGTATTGAAGAATCTAAATGTA
GTTATAGAGAGTGGTTGGAAGGTTGGAATAGTCGGTAGAACGGGTGCTGGAAAATCATCA
CTAATCTCTTCTCTGTTTCGTCTTTCCATATTAGAGGGTGAAGTCCTTATTGACGATGTA
GATACCGCCTACCTTGCACTTCAGGAAGTAAGGTCTAAAATATCGATTATACCGCAAGAA
CCGGTACTGTTCTCCGCTACAATACGATACAATTTAGATCCATTCAACTGTTATGATGAC
GAACAACTTTGGAAAGCGCTTGAAGCGGTCGATTTGAAGGCTGCGATACCTGCACTAGAT
TTCAAAGTTTCCGAAGGTGGTTCAAACTTTTCTCTTGGACAGAGACAACTCGTGTGCCTT
GCTCGTGCTATCCTTCGCGGTAACCGAATTCTTGTGTTGGATGAGGCCACAGCAAACGTG
GATCCAAAAACGGACGAGTTTATCCAAAGAACAATAAGAAAGCGTTTTTCAGACTGCACA
GTTTTGACAGTTGCACATCGACTCAACACTATTATGGACTCCGATCGCGTGATGGTAATG
GATACCGGACGATTAGTTGAGTTTGATCATCCTTACAAATTGCTCTGCAACCCTGAAGGT
CATTTCACAAAAATGGTTAAAGAAACTAGTGACAAATTGGCAGCTCAGCTCTACGAAATA
GCAAAAAGAACATATCTCGAAAACGGAAACGTAATAGAGTGA
Protein sequence:
MTKTFWLSYAPSGVMFLIQALILKPFQPVALSILLTYWEPGSNMTYDQAVYCAFTVILMS
LLIAFLNHHGTYSTQQFGMKVRIAACSLIYRKVMRMSSGALAQTTAGQVVNLLSNDVNRF
DYAFIYTHFIWLLPLQVIIVCYLIYIKIGYAAIVGVIGIVLQTIPVQSYMSKLAARLRMK
TASRTDERVRIMDEIISGMQVIKMYAWEKPFEQVVALARKNEINCITSASYLRGVYLSFM
VFTERLTLYITLLSYSLFGFQVTADIVFPLAQFFNTLQGTLSIIMSNAVSFLAEALISVQ
RLEAFMLLDEREDLRSVAGVDIAKLVASVEKKNKNLREIDLCANKFKKIDEEGIYNPGFD
CDEKGLMTPAISTTPISNDVGILIQNVSASWTEDGPITLRNINITVPKGKLCAIIGSVGS
GKSSILQLLLNELRSSAGRIHLCGPLSYASQEPWLFVATVRQNILFGLPYNPKKYKEVVR
VCALQKDFLQFPHGDQTLVGERGASLSGGQRARINLARAVYRQADVYLLDDPLSAVDAHV
GRQLFDECITGYLRHTTRVLVTHQLHYLKVADYIVIMNNGIIEAKGTYEELLTSGKDFAK
LLCSVQEDDNTEAEKPLPISRRTSARLSTTRRPSLAESTTGCDIPAQEMEEEERESGSMG
WHVYGAYLKAGGRTARIVFMVLLLVIGQLSATLCDYWVTFWTNEVTLLKERQSNVTKDYE
QDIKPVNSTFSLNSYFSGIKATPNLNIHAYIGPLDTSQYLYVYTALIVCCIFFITARAFM
FFKVCMTASRNLHNDMFHAMLRGVMRFFDMNSSGRILNRFSKDIGALDELLPRFLLECIQ
IYLVMFSILTLNAAALVWTLLPTTIILLLFYVILQIYLKSAQSIKRLEGTTRSPVFSHMS
ATLNGISTIRSSGAQQRLIQEFDHFQDIHTSTWSSYLASGVTLGFWLDFICVIYLAIVIV
AFLVIDSKTIFSGNVGLAISQTLILTGMLQFGVRQTAEVISQMTSVERILQYTNIEKESQ
WEKGAKETPKGWPWRGRIEFRNCYMKYTPEDLPVLKNLNVVIESGWKVGIVGRTGAGKSS
LISSLFRLSILEGEVLIDDVDTAYLALQEVRSKISIIPQEPVLFSATIRYNLDPFNCYDD
EQLWKALEAVDLKAAIPALDFKVSEGGSNFSLGQRQLVCLARAILRGNRILVLDEATANV
DPKTDEFIQRTIRKRFSDCTVLTVAHRLNTIMDSDRVMVMDTGRLVEFDHPYKLLCNPEG
HFTKMVKETSDKLAAQLYEIAKRTYLENGNVIE