New model in OGS2.0 | DPOGS211110  |
---|---|
Genomic Position | scaffold686:+ 30600-31575 |
See gene structure | |
CDS Length | 678 |
Paired RNAseq reads   | 170 |
Single RNAseq reads   | 814 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002985 (4e-104) |
Best Drosophila hit   | Platelet-activating factor acetylhydrolase alpha, isoform B (1e-72) |
Best Human hit | platelet-activating factor acetylhydrolase IB subunit beta isoform a (5e-52) |
Best NR hit (blastp)   | platelet-activating factor acetylhydrolase alpha subunit-like protein [Bombyx mori] (2e-104) |
Best NR hit (blastx)   | platelet-activating factor acetylhydrolase alpha subunit-like protein [Bombyx mori] (9e-112) |
GeneOntology terms    | GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity GO:0005575 cellular_component GO:0008150 biological_process |
InterPro families    | IPR013831 Esterase, SGNH hydrolase-type, subgroup IPR013830 Esterase, SGNH hydrolase-type |
Orthology group | MCL17385 |
Nucleotide sequence:
ATGAATCCCTGTTCCGTGGCAGTTCCGCAACAAGATACTGATGGTGATGGACGTTGGAAT
AGCATCCACAATAGATTCCTTTCGGACGCAAAAGGAAAGGATGGAGATGTTATATTCATC
GGTGATTCTATACTACAAGCTTTAGAACATACGGAAGTTTGGAACCAATGGTTTGCACCA
CTTCACTGCCTTAATTTTAGTATTTACAAAGATCAAACTCAAAATGTTTTGTGGCGTATA
AGAAATGGAGAGCTTGATCATGTTGACCCGAGAGTTATAGTTCTGCATGTTGGAACAAAT
AATGTTGAGCACACACCTGAGCAAGTATGTGAGGGAATCTTAGAAATAGTTCACACAATA
AGAGAAAAGCATCCAAGTGTTTATATTGTTTTACCTAGTCTACTTCCTAGAGGACAACAT
CCAAATGTACTGAGAGACAGGAACTCGAAAATTAATCAGCTTTTGAAAGAAAAAGTTGCT
AATATGAAAAAGGTTGAAATGGTGTCAATAGACAAAGGGTTTATCCAGAACGATGGAACA
ATAAGCCATCATGATATGCATGATTACCTCATACCGACTAATGCAGCTTGCAGGAAGGCC
TTCGAACCTGTTTATGATCTCTTACAACAAATTTTATCAGAGGGTGAAACCGAAAAGGAT
TTGACGCCCTCAGAATAA
Protein sequence:
MNPCSVAVPQQDTDGDGRWNSIHNRFLSDAKGKDGDVIFIGDSILQALEHTEVWNQWFAP
LHCLNFSIYKDQTQNVLWRIRNGELDHVDPRVIVLHVGTNNVEHTPEQVCEGILEIVHTI
REKHPSVYIVLPSLLPRGQHPNVLRDRNSKINQLLKEKVANMKKVEMVSIDKGFIQNDGT
ISHHDMHDYLIPTNAACRKAFEPVYDLLQQILSEGETEKDLTPSE