| New model in OGS2.0 | DPOGS205122 |
|---|---|
| Genomic Position | scaffold11092:+ 51-3858 |
| See gene structure | |
| CDS Length | 1029 |
| Paired RNAseq reads | 646 |
| Single RNAseq reads | 1795 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011198 (9e-54) |
| Best Drosophila hit | pollux, isoform D (2e-22) |
| Best Human hit | TBC1 domain family member 1 (3e-12) |
| Best NR hit (blastp) | PREDICTED: similar to Pollux protein [Nasonia vitripennis] (3e-32) |
| Best NR hit (blastx) | PREDICTED: similar to Pollux protein [Nasonia vitripennis] (1e-33) |
| GeneOntology terms | GO:0033627 cell adhesion mediated by integrin GO:0009986 cell surface GO:0005178 integrin binding GO:0005622 intracellular GO:0005097 Rab GTPase activator activity GO:0032313 regulation of Rab GTPase activity |
| InterPro families | ND |
| Orthology group | ND |
Nucleotide sequence:
ATGAAAGCAAAGCGTTCTCTGTCGAGTGGTTTCGATCATCTGCTGAAGAGGAGACAGAGC
AAGGATGAAGGGAATCTACTGCAACTCCCGCGGAAGGATATTTCTCTGAGTCCAGCCCGA
CCGAGTTCAGAGTCGGATCATCCTGAGTCACCGGACAACCAGAGGAAAGCAACCTCACCT
GGTTACGAACCACCAGCTACGAAAGAAATTGTTACGCCAGACGACACAAATGATAACAAA
GAAGACTCAAAAGCTGTCAATAGTCCCATGATGGACATCTTCCTAAAAGTGAGCGACAGT
CGCACATCAGCTGCCGGAAATAACGAAAAAGATTCAACATGGCGCCAGGCGATATATGAG
AAAGTTCTACAACCGAACATAGAACAAGAAGGTTACATAGACGATATTATATCTCAGTCA
ATCAAACCAACGGCCGTCGCGGACGACGAGACGGTCGAGAGAAGAATTGAGACAGCTGTG
GAAGATGGCCATCGACCAGACGGTGCTGCTGGTGAGGATGGAAAAAGAAAACCAGAGACT
GAGAGTCGTGGTGGCCTGGAGGGTAAAGCCCCGTCTCTCACACGTGAGGGTGCGGGTTCG
AAACCTGGCAATTCCCAATGTGATATTTCCGAGTCGTATGTACTTTCTAAGAGTATTCAG
ACACCACTGACGGACGGTGAGGGAGAACACCAGGGCGAGGAATCATCGGCTGTTCGGCGC
ATAAAGCTAGAATACACTGAGCTTGACACTTGTGCTCCCGGCGTGTCGCTCATGTGGGAC
GATCTGCTGTCCCGAGACAGATCTCACCCGGTCGCCAAAATAGATAGACACATGCTCACG
CAGGCTGTGAGACAAGGCGTTCCTCGCATGTCTAGAGGCGGCGTCTGGTACATCCTGGCT
GAACAAGCCTGCATCCGGATCCCTCCGCCGGATGTCAAACAGTTTCCGTTATACAACACG
CCGTACGCCACACTATTATCTGGTCTCACTAAACACCAACACGCCATTTTGATTGACCTC
GGTAAGTAG
Protein sequence:
MKAKRSLSSGFDHLLKRRQSKDEGNLLQLPRKDISLSPARPSSESDHPESPDNQRKATSP
GYEPPATKEIVTPDDTNDNKEDSKAVNSPMMDIFLKVSDSRTSAAGNNEKDSTWRQAIYE
KVLQPNIEQEGYIDDIISQSIKPTAVADDETVERRIETAVEDGHRPDGAAGEDGKRKPET
ESRGGLEGKAPSLTREGAGSKPGNSQCDISESYVLSKSIQTPLTDGEGEHQGEESSAVRR
IKLEYTELDTCAPGVSLMWDDLLSRDRSHPVAKIDRHMLTQAVRQGVPRMSRGGVWYILA
EQACIRIPPPDVKQFPLYNTPYATLLSGLTKHQHAILIDLGK