| New model in OGS2.0 | DPOGS206403 |
|---|---|
| Genomic Position | scaffold835:- 25558-37586 |
| See gene structure | |
| CDS Length | 1362 |
| Paired RNAseq reads | 51 |
| Single RNAseq reads | 143 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003715 (1e-145) |
| Best Drosophila hit | nicotinic acetylcholine receptor alpha 30D, isoform E (0.0) |
| Best Human hit | neuronal acetylcholine receptor subunit alpha-7 isoform 1 precursor (1e-91) |
| Best NR hit (blastp) | nicotinic acetylcholine receptor subunit alpha 6 isoform 4 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | GA17977 [Drosophila pseudoobscura pseudoobscura] (0.0) |
| GeneOntology terms | GO:0004889 nicotinic acetylcholine-activated cation-selective channel activity GO:0005892 nicotinic acetylcholine-gated receptor-channel complex GO:0006811 ion transport GO:0045211 postsynaptic membrane GO:0017085 response to insecticide GO:0016021 integral to membrane |
| InterPro families | IPR006201 Neurotransmitter-gated ion-channel IPR002394 Nicotinic acetylcholine receptor IPR006029 Neurotransmitter-gated ion-channel transmembrane domain IPR006202 Neurotransmitter-gated ion-channel ligand-binding IPR018000 Neurotransmitter-gated ion-channel, conserved site |
| Orthology group | MCL10265 |
Nucleotide sequence:
ATGAACAAACGGAGGGAATGGAATGACTACAACCTGAGGTGGAACGACAGTGACTACGGT
GGAGTTAAGGATCTACGCATCACACCCAACAAACTATGGAAACCAGACGTTCTCATGTAC
AACAGTGCTGACGAGGGTTTTGATGGGACGTACCAGACGAACGTGGTGGTCAGAAACAAC
GGCAGTTGTCTGTACGTACCACCCGGCATTTTCAAGAGCACATGCAAGATAGACATCACC
TGGTTTCCCTTCGATGACCAACATTGCGACATGAAGTTCGGTAGCTGGACTTACGACGGC
AACCAGTTGGATCTGGTTTTAAAGGATGAAGCTGGTGGTGACCTGTCCGATTTTATCACA
AACGGCGAGTGGTATTTAATAGGTATGCCGGGAAAGAAAAACACCATAACATACGCGTGT
TGTCCAGAACCATATGTAGACGTGACATTTACAATCATGATAAGAAGACGGACACTCTAC
TATTTCTTCAACCTGATAGTTCCTTGTGTACTTATATCATCAATGGCACTTCTCGGTTTC
ACACTGCCACCAGACTCCGGAGAAAAATTAACACTCGGAGTCACTATACTTCTATCGCTG
ACGGTGTTTCTGAACCTGGTTGCCGAGACCCTGCCGCAGGTCTCCGACGCTATCCCCCTG
TTAGGTGTTACAATTCTCCTGTCGCAAACTGTTTTCTCCCTATTGGTGGGGCACGTTATC
ACTAAAACCTCTGAGGCGATCCCCCTAATAGGGACTTACTTCAATTGCATCATGTTTATG
GTGGCCTCGTCTGTGGTCTTGACTGTTGTCGTGTTAAACTACCATCACAGAACAGCAGAC
ATACACGAAATGCCGCAATGGATAAAAACAGTGTTCCTACAATGGCTGCCGTGGATTTTA
CGTATGTCGAGGCCGGGGAAGAAAATAACGAGGAAAACAATAATGATGTCGAACAGAATG
AGAGAATTGGAGTTGAAAGAGCGCTCGTCTAAATCATTGCTGGCGAACGTTTTGGATATA
GACGACGACTTCCGACATGTCCCGCCTCCACCCAATAGTACTGCGTCTACCGGGAATCTC
GGACCAGGAACGGACTTTCGGCGTTCGTTCGTGAGGCCGTCTACGATGGAAGACGTCGGC
GGAGGTCTCGGAAGCCACCATCGGGAGCTCCACTTAATATTAAGAGAATTGCAGTTCATC
ACGGCGAGGATGAAGAAGGCCGATGATGAAGCTGAACTCATCAGCGATTGGAAATTTGCA
GCGATGGTTGTAGACAGGTTCTGTCTGTTCGTGTTCACATTATTCACTATCATCGCGACA
GTGGCCGTACTCCTGTCCGCTCCCCATATCATCGTTCAGTGA
Protein sequence:
MNKRREWNDYNLRWNDSDYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYQTNVVVRNN
GSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQLDLVLKDEAGGDLSDFIT
NGEWYLIGMPGKKNTITYACCPEPYVDVTFTIMIRRRTLYYFFNLIVPCVLISSMALLGF
TLPPDSGEKLTLGVTILLSLTVFLNLVAETLPQVSDAIPLLGVTILLSQTVFSLLVGHVI
TKTSEAIPLIGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPQWIKTVFLQWLPWIL
RMSRPGKKITRKTIMMSNRMRELELKERSSKSLLANVLDIDDDFRHVPPPPNSTASTGNL
GPGTDFRRSFVRPSTMEDVGGGLGSHHRELHLILRELQFITARMKKADDEAELISDWKFA
AMVVDRFCLFVFTLFTIIATVAVLLSAPHIIVQ