| New model in OGS2.0 | DPOGS201553 |
|---|---|
| Genomic Position | scaffold14972:- 356-2394 |
| See gene structure | |
| CDS Length | 1173 |
| Paired RNAseq reads | 590 |
| Single RNAseq reads | 1516 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006028 (2e-62) |
| Best Drosophila hit | mediator complex subunit 15 (7e-12) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 15 isoform a (4e-15) |
| Best NR hit (blastp) | PREDICTED: similar to mediator complex [Tribolium castaneum] (3e-34) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC013685 [Tribolium castaneum] (7e-20) |
| GeneOntology terms | GO:0016592 mediator complex GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0016455 RNA polymerase II transcription mediator activity GO:0005634 nucleus GO:0005737 cytoplasm GO:0045449 regulation of transcription GO:0006350 transcription |
| InterPro families | IPR019087 Mediator complex, subunit Med15, metazoa |
| Orthology group | MCL11292 |
Nucleotide sequence:
ATGGGTTCTGATGATAATTGGCGAACGCAGAATTTTCGACAGAATGTTGTGACCAAGATA
GAGGAGGTTATTCAGAAGTCAGGTATGCAAGTTGCTCGCAACAGCAGTGAAATGGAAAAT
CACGTCTTCATGAAAGCTAAGACTAGAGAGGAATATTTAAATATGGTTGCAAAATTGATT
TTACATGTGAGGGAGATGTCGCAACCAAAACAAAACCAAGGTCAAAACATGCAAGGGCCC
AATCAAAATCAAGGAGGTCCAGCAAACCAAGCTCAAACTCAGCAGGGACAGCCTCAACAA
GGTTCTTCAAACCAAGCAGGGATGGCCACTGACCCTATAAATGCCTTACAGAATATGACC
TCACAGGGCTCAAGGAACCAAATGATGAACATGGGACCAGGTCAGATGCAACAAGGAGTT
CTTGGACCAAATCCTGGAATGGGAGGGATGCAGACACAAATGGGACAACAAGGGCCCATT
GTATCACAAGGCCCACAAGCTCAGACTGCTACAAATCTGCTCCAAACATTAAACCAGAGA
CCTCAATTAAATATGCAGCTGCAGAACAAATTAAGTGGGCCAATAGGCATGGCACCCAAC
CAGGGACAGATGGGTAACAATATGGTCGGAGGTATGGGGATGGGTAATATGGGCAGTCAG
TTGCAAAATCACTTAGCGGCTCCGGGAATGCAGGGGCAGATGATGCCCAACATGTCTATG
TCGAACACCATGCAGGTCCCAATGTCGGGAGCGAGCACCATTGTAGGGCAAATGCAATGC
AACCAGGTTGTGGGCGGCATTGGTGGTCAGATGACACAGAACACTATGCAGGGACAGATG
CCTAATCAAATGGTTGGCAACATGGGCAACAATCAGCTGGTGAACATCAATATGCTGCAA
ATGCATCGCAGTCAGGGTAAGGAGGTGGTGATGGGAGCCGGATACACCCAGCGTGCTCCA
CCACACAACCAGTTCCTAAGACAGAGCCCTTCGCCTTCTGCGTCATCTCCGAACATGCCC
GGGCCTAGTCCTGTGTCCATGGGCGGGGGAGTCCTCAGCGGCGCGTTATCTTCTCCCATG
GGTTTGGGCGGGCTCGGCGCGTGCTCGGGCGGCTCGCCCAACCCCAGCGGCAACCATCAC
ATGACGCACCACCCACCACAACAACGGTACTGA
Protein sequence:
MGSDDNWRTQNFRQNVVTKIEEVIQKSGMQVARNSSEMENHVFMKAKTREEYLNMVAKLI
LHVREMSQPKQNQGQNMQGPNQNQGGPANQAQTQQGQPQQGSSNQAGMATDPINALQNMT
SQGSRNQMMNMGPGQMQQGVLGPNPGMGGMQTQMGQQGPIVSQGPQAQTATNLLQTLNQR
PQLNMQLQNKLSGPIGMAPNQGQMGNNMVGGMGMGNMGSQLQNHLAAPGMQGQMMPNMSM
SNTMQVPMSGASTIVGQMQCNQVVGGIGGQMTQNTMQGQMPNQMVGNMGNNQLVNINMLQ
MHRSQGKEVVMGAGYTQRAPPHNQFLRQSPSPSASSPNMPGPSPVSMGGGVLSGALSSPM
GLGGLGACSGGSPNPSGNHHMTHHPPQQRY