| New model in OGS2.0 | DPOGS215503 |
|---|---|
| Genomic Position | scaffold2718:- 14011-30100 |
| See gene structure | |
| CDS Length | 1434 |
| Paired RNAseq reads | 154 |
| Single RNAseq reads | 508 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010356 (2e-10) |
| Best Drosophila hit | synaptotagmin 1, isoform A (9e-60) |
| Best Human hit | synaptotagmin-10 (3e-101) |
| Best NR hit (blastp) | PREDICTED: similar to synaptotagmin X [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to synaptotagmin X [Tribolium castaneum] (3e-177) |
| GeneOntology terms | GO:0005215 transporter activity GO:0046872 metal ion binding GO:0030054 cell junction GO:0045202 synapse GO:0006950 response to stress GO:0016020 membrane GO:0016021 integral to membrane GO:0030672 synaptic vesicle membrane GO:0031410 cytoplasmic vesicle |
| InterPro families | IPR001565 Synaptotagmin IPR020477 C2 region IPR000008 C2 calcium-dependent membrane targeting IPR018029 C2 membrane targeting protein IPR008973 C2 calcium/lipid-binding domain, CaLB |
| Orthology group | MCL15158 |
Nucleotide sequence:
ATGAGTTATTATGACTTTCGTTGTGGGCTTACTCAACAACAAAGCAATGAGGTTTGGCCG
CCTGAGGGTTTGGAACTACAAACGAACGTGAGATCAAACTCAGTGGACTACGCAGCAGCG
TTGATGCTAGCAGCAATGGCGGCCGTTCTGTTAGCTGCTGTTGGATACCAATGTGCTGCC
ACCTGGAGGTGGATTATGGGAAGAACTCGACGTGACTCTGAAGATAGCAATTGTGATTCC
CTCTCCCGACAAGCAGCTATTCGCATCAGCCACTCGCTCCCCGACCTTCAGACGGAACCC
TTGAAACAGGAGTACGTACAGGAACACAAGGATGCCGGCAAGAAGGTGCTGCGCCAAACG
ACGCTTCCTATTGTACCAGATCGTCACCAAACATTCCAACGTCAACTTTCACACCGACTG
GATCTTCCATCCATCCAATTCAGCATCTGCAGTCTAGAGAGAGCGGATTCTTCCATTGGA
CTTATAAAGCCGGAATTATACAAGAACGAGCTTGTCCGTCAATCTTCTACTGATAGCGGT
GAACTTGAATTTTGCGGAAAACTCCACTTCGCTTTGAAGTATGATCAAGAAGTTGAGGCT
TTAGTCGTAAAGATATTCGAAGCTCGGGACTTGCCAATTAAGGACGTGTCTGGGAGTAGC
GATCCTTACATCAAGGTGTTCTTGTTACCAGACCGTAAGAAGAAATTCCAGACCAAAGTG
CATCGTAAAAATTTGAATCCCGTGTTCAATGAAACTTTCTTGTTTAGTGTTGCTTATGAA
GAACTCCGTCAGCGCTTTTTACAATTCTCCGTATACGATTTTGATCGCTTCAGTCGTCAT
GACCTGATTGGACACGTGGTGTTGAAGGGACTCCTTGAGTCAGCTGACCTGCATCAAGAG
ATTGCTTACACTATGAACATATTGGCGCCACCACAGGAGAAAAAGGACCTGGGAGAGTTG
ATGCTTTCTCTATGTTACTTGCCGACCGCGGGCCGCCTTACTGTCACTGTTATCAAGGGC
AGAAATCTGAAGGCAATGGACATTAATGGATCTTCAGATCCCTACGTCAAAATATGCCTG
AACTGTCAAGGGAAAAGGATAAAGAAGAAGAAAACGACTGTCAAGAAAAATACCCTCAGT
CCGGTGTATAATGAGGCATTAGTTTTTGATCTACCCGCAGAAAACGTGTATGACGTCACT
CTACTTGTCAAGGTCATCGATTACGATCTGATTGGTCCAAACGAGCTAATCGGTTGCACG
GCAATCGGTTCTTCACTAATCGGAATCGGACGCGATCATTGGCTGGAGATGTTGGATAAC
GCCAGGAAGCCTGTAGCACAATGGTATCCTCTAAACAAGAGCCCTCCGACAAATATCAAT
TTACCAGCTAATGAACAACAGAATACACCACTGAGCTGTTTGAACACAAGGTAG
Protein sequence:
MSYYDFRCGLTQQQSNEVWPPEGLELQTNVRSNSVDYAAALMLAAMAAVLLAAVGYQCAA
TWRWIMGRTRRDSEDSNCDSLSRQAAIRISHSLPDLQTEPLKQEYVQEHKDAGKKVLRQT
TLPIVPDRHQTFQRQLSHRLDLPSIQFSICSLERADSSIGLIKPELYKNELVRQSSTDSG
ELEFCGKLHFALKYDQEVEALVVKIFEARDLPIKDVSGSSDPYIKVFLLPDRKKKFQTKV
HRKNLNPVFNETFLFSVAYEELRQRFLQFSVYDFDRFSRHDLIGHVVLKGLLESADLHQE
IAYTMNILAPPQEKKDLGELMLSLCYLPTAGRLTVTVIKGRNLKAMDINGSSDPYVKICL
NCQGKRIKKKKTTVKKNTLSPVYNEALVFDLPAENVYDVTLLVKVIDYDLIGPNELIGCT
AIGSSLIGIGRDHWLEMLDNARKPVAQWYPLNKSPPTNINLPANEQQNTPLSCLNTR