New model in OGS2.0 | DPOGS207363  |
---|---|
Genomic Position | scaffold865:+ 58192-62450 |
See gene structure | |
CDS Length | 1272 |
Paired RNAseq reads   | 260 |
Single RNAseq reads   | 593 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013761 (3e-11) |
Best Drosophila hit   | CG4221 (3e-89) |
Best Human hit | F-box/LRR-repeat protein 7 (5e-60) |
Best NR hit (blastp)   | AGAP003285-PA [Anopheles gambiae str. PEST] (2e-102) |
Best NR hit (blastx)   | AGAP003285-PA [Anopheles gambiae str. PEST] (3e-99) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families    | IPR001810 F-box domain, cyclin-like IPR022364 F-box domain, Skp2-like IPR006553 Leucine-rich repeat, cysteine-containing subtype |
Orthology group | MCL15215 |
Nucleotide sequence:
ATGTCAAGCGGGAGTTGCTCGGGGCCGGGTGTGTGTGGTGGGGCGAGACGTAGACCTCCC
CCTCCTCCCGAGCCTGCACTGTCCTTGGCTGCAGACCTGAGTGAGCTGAGCCTCGACCAG
GGCTACCACACCCTGGCTGACTGCGGCCCCCCTAGGAGGAGGAGGGATAACACGCTCACT
GACGCTCTGTGGCTGAAGATACTGTCCTACCTTGAGGTGTCAGATTTATGCCGAATGTCC
CGGGTGTCCAGACGATGGTCCCGTTTCGTGGCCAGGCTGACTGCCAGACCTGAACCCTGG
AGGCGGGTACGGGCTTCTGGTCCCCTGGAGGTGGCTGCAAGGTGCGCGGGTGCAAGAGCT
GGACCCTGTGTTGGTGCTGTTAGGGAATGGAGGTCCAAGACCTGTTCTGTGACGGTAGCC
GGAGCACAGTTATTAGCGGCGACCTTCAGGAACTTAACTCATTTAGCTTTAACGAACTCA
AATACAGTGGACGCAAGAGCTTTGGCCCCAATTATCACAGATTTGGTTGACCTGCGCCAT
GTTGATTTAACAGGCTGTCCAAACATGGACTGGCCAGAGTGGAATTGGCTGGAAAGTCGT
CTTACAAACAGACGGCCCCCCATAGAGTATATAGACCTCACTGACTGCACCGCTGTCACC
GACGCCGGCCTCTGCGCTCTGCTCCACACCTGCCCTTCATTACAGTACCTTTATCTCAGG
AGATGTACTCTAGTCACTGATGCAGGAGTCCGATGGATACCTTCATATTGCGCTCTCAAA
GAACTGAGCGTGTCTGATTGTACGGGGGTCACGGACTTCGGTTTATACGAACTGGCGAAA
TTGGGGCCAGCGTTACGATACCTATCCGTTGCTAAATGTTCTCAGGTATCAGATTCAGGG
GTCCGAACTCTCGCACGTCGCTGTTATAAGCTACGTTATTTGAACGCCCGTGGCTGTGGG
GCGCTGGGGGATGATGGGGCCGAGGCCATCGCCAGGGGCTGCTCCAGATTAAGAGCTCTG
GACCTTGGTGCCACTGATGTATCGGAGGCCGGGCTGCAGATTCTTGCCAGATGCTGTCCG
AATCTTAAGAAGCTGGCGTTGAGAGGCTGTGAACTCATCGGCGACGATGGTTTGGAAGCC
GTTGCGTATTATTGTAGAGGTTTGACACAGTTAAACATTCAGGACACGCCGGTTACATTA
AGAGGATACAGAGCTGTTAAGAAGTACTGCAAGAGATGTGTCATAGAACATACAAATCCA
GGATTCTGTTGA
Protein sequence:
MSSGSCSGPGVCGGARRRPPPPPEPALSLAADLSELSLDQGYHTLADCGPPRRRRDNTLT
DALWLKILSYLEVSDLCRMSRVSRRWSRFVARLTARPEPWRRVRASGPLEVAARCAGARA
GPCVGAVREWRSKTCSVTVAGAQLLAATFRNLTHLALTNSNTVDARALAPIITDLVDLRH
VDLTGCPNMDWPEWNWLESRLTNRRPPIEYIDLTDCTAVTDAGLCALLHTCPSLQYLYLR
RCTLVTDAGVRWIPSYCALKELSVSDCTGVTDFGLYELAKLGPALRYLSVAKCSQVSDSG
VRTLARRCYKLRYLNARGCGALGDDGAEAIARGCSRLRALDLGATDVSEAGLQILARCCP
NLKKLALRGCELIGDDGLEAVAYYCRGLTQLNIQDTPVTLRGYRAVKKYCKRCVIEHTNP
GFC