New model in OGS2.0 | DPOGS203106  |
---|---|
Genomic Position | scaffold2349:+ 681-10257 |
See gene structure | |
CDS Length | 1221 |
Paired RNAseq reads   | 468 |
Single RNAseq reads   | 2301 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011129 (3e-62) |
Best Drosophila hit   | CG1443 (4e-32) |
Best Human hit | fatty acyl-CoA reductase 1 (2e-19) |
Best NR hit (blastp)   | fatty-acyl CoA reductase 2 [Ostrinia nubilalis] (3e-106) |
Best NR hit (blastx)   | fatty-acyl CoA reductase 2 [Ostrinia nubilalis] (7e-88) |
GeneOntology terms    | GO:0005488 binding GO:0008152 metabolic process GO:0003824 catalytic activity |
InterPro families    | IPR013120 Male sterility, NAD-binding IPR004262 Male sterility IPR016040 NAD(P)-binding domain |
Orthology group | ND |
Nucleotide sequence:
GAATTGGAGAACACAGTGCGGCTATCGGACGTCGAGAACCAGGCTATGAATCCGACAGCC
CCAATTCTTGATTACTCAGAGGACCACGAGTTCGTGTCGGCGAACAAGCTGGACGATTAT
TACTCCCAGGAAGACAAGAACGATGCCAAGGAGGCCGAGAAGCATCGTCTCACTAAGGGT
ATGGCGCAGCGAACGGAAATACAAGAATTTTATAAAGATCAGTGTGTGTTTTTGACCGGT
GGGACTGGGTTTTTGGGGAAAGTTTTAATCGAGAAACTTCTACGTTCTTGTAAAGATATT
GACACTATTTACGTTTTGGTGCGTCCGAAGAAGGGCAAGGATCCGACGACGAGGATTCAC
GAAATGTTGGACGAATTTGTGTTCGAGAGAGCACACAACGAGAATCCGAAAGGTATTCAC
AAGGTGGTCCCGGTTGTTGGGAATATGGAACTGCCTGATCTGGGACTCAGTCTCGAAGAC
AGAAAGACGCTGACATCCAGGGTCCTTAGAACAATGTACATGGATTTAAACAAAGTGGCT
GACATGGTGCCCGTGGATCTTTGTGTCAATGCTATTATAGTATCCGCTTACCACACCGCC
AAAAACTTCAAAGAAAACCAAACGTCTAATATACCGATATATAACTTCGTTTCCGGCGCC
CAAAGTCCCGTCACGTGGCGACAGTTCATAGAGTACAATATGAAATATGGTTTTCACAAT
CCCACCACGAAGGCTGTGTGGTACTACGGACTGAATCCAACGAATAATTACTACATGTTC
CTGTTCTACAACTTCTTCCTTCATTATCTCCCGGCGTTGCTACTAGACGTGTTTAGTTTT
CTGACCGGCCAACGACGAAAAATGCTCAAGTTCTATTCCAAGGTCATAAAGCTGGCTCAC
ATTCTGTTCTACTTCTCAACTCAAGAGTGGTGTTTTTCCGATCACGGGGTCCGCTCCATG
TGGAGCTCTCTGTCTGATAGAGACAGAGCCGTATTCAATTTCAACATGGCGGATATGTCC
TGGGACTATATGGCGGAAACCTTCTTGTTGGGTTTAAGAGTGTATTTAGTTAAGGATGAT
CTGTCCACGTTGCCTGAAGCTAGGAAGAGATGGAACAGACTGTACTACATGCATCAACTT
TTGAAGATAACCACATTTAGTGTGGTGCTATACCTCGGATACTTACTCCTAACAGGTCTA
GCGAGCATGATCTTAGGGTAA
Protein sequence:
ELENTVRLSDVENQAMNPTAPILDYSEDHEFVSANKLDDYYSQEDKNDAKEAEKHRLTKG
MAQRTEIQEFYKDQCVFLTGGTGFLGKVLIEKLLRSCKDIDTIYVLVRPKKGKDPTTRIH
EMLDEFVFERAHNENPKGIHKVVPVVGNMELPDLGLSLEDRKTLTSRVLRTMYMDLNKVA
DMVPVDLCVNAIIVSAYHTAKNFKENQTSNIPIYNFVSGAQSPVTWRQFIEYNMKYGFHN
PTTKAVWYYGLNPTNNYYMFLFYNFFLHYLPALLLDVFSFLTGQRRKMLKFYSKVIKLAH
ILFYFSTQEWCFSDHGVRSMWSSLSDRDRAVFNFNMADMSWDYMAETFLLGLRVYLVKDD
LSTLPEARKRWNRLYYMHQLLKITTFSVVLYLGYLLLTGLASMILG