| New model in OGS2.0 | DPOGS202037 |
|---|---|
| Genomic Position | scaffold795:- 21881-22858 |
| See gene structure | |
| CDS Length | 786 |
| Paired RNAseq reads | 29475 |
| Single RNAseq reads | 72608 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000867 (1e-107) |
| Best Drosophila hit | string of pearls (1e-96) |
| Best Human hit | 40S ribosomal protein S2 (7e-93) |
| Best NR hit (blastp) | ribsomal protein S2e [Papilio dardanus] (7e-146) |
| Best NR hit (blastx) | ribosomal protein S2 [Bombyx mori] (8e-111) |
| GeneOntology terms | GO:0006412 translation GO:0022627 cytosolic small ribosomal subunit GO:0003735 structural constituent of ribosome GO:0005840 ribosome GO:0003723 RNA binding GO:0005811 lipid particle |
| InterPro families | IPR013810 Ribosomal protein S5, N-terminal IPR005324 Ribosomal protein S5, C-terminal IPR000851 Ribosomal protein S5 IPR014720 Double-stranded RNA-binding-like IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR018192 Ribosomal protein S5, N-terminal, conserved site IPR005711 Ribosomal protein S5, eukaryotic/archaeal IPR020568 Ribosomal protein S5 domain 2-type fold |
| Orthology group | MCL10896 |
Nucleotide sequence:
ATGGCGGACGCAGCTCCAGCCGGTGGACGCGGTGGTTTCCGTGGCGGATTCGGATCACGT
GGTGGTGATAGAGGACGTGGTGGCCCACGCGGTCGTGGTCGTGGTCGCGGCCGTGGCCGT
GGACGCGGTAAGGAAGAGCAGAAAGAATGGGTGCCTGTAACCAAGCTGGGACGTCTCGTG
CGAGAGGGAAAGATCGACAAGCTTGAGAGCATTTATCTGTTCTCATTGCCCATTAAAGAA
TTCGAAATTATCGATTTCTTCCTTGGTGCCTCTTTGAACGATGAGGTTTTGAAGATCATG
CCCGTACAGAAGCAGACTAGGGCTGGTCAACGTACCCGTTTCAAGGCTTTCGTGGCTATC
GGGGACAACAATGGACACATTGGTCTTGGAGTTAAGTGCAGCAAGGAAGTAGCTACAGCT
ATCCGAGGCGCTATTATTCTAGCAAAATTGTCCGTTCTGCCTGTCCGCAGAGGATACTGG
GGTAACAAGATCGGCAAGCCTCATACTGTACCCTGCAAGGTAACTGGTAAGTGTGGTTCA
GTCACTGTCCGTCTTATTCCTGCTCCCCGTGGTACTGGTATTGTGTCGGCCCCTGTTCCC
AAGAAGCTTCTTCAGATGGCCGGAGTCCAGGATTGCTACACCTCAGCTCGTGGTTCAACT
GGAACCCTCGGCAACTTTGCCAAAGCCACCTATGCGGCCATTGCAAAGACCTATGCCTAC
TTGACACCAGACTTATGGAGGGACATTCCATTGACCAAATCACCATACTCTGAATTCAAA
GTCTAA
Protein sequence:
MADAAPAGGRGGFRGGFGSRGGDRGRGGPRGRGRGRGRGRGRGKEEQKEWVPVTKLGRLV
REGKIDKLESIYLFSLPIKEFEIIDFFLGASLNDEVLKIMPVQKQTRAGQRTRFKAFVAI
GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGS
VTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATYAAIAKTYAY
LTPDLWRDIPLTKSPYSEFKV