| New model in OGS2.0 | DPOGS213986 |
|---|---|
| Genomic Position | scaffold295:+ 28395-32319 |
| See gene structure | |
| CDS Length | 2475 |
| Paired RNAseq reads | 4088 |
| Single RNAseq reads | 9644 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008256 (0.0) |
| Best Drosophila hit | CG5033, isoform A (0.0) |
| Best Human hit | ribosome biogenesis protein BOP1 (6e-166) |
| Best NR hit (blastp) | PREDICTED: similar to ribosome biogenesis protein bop1 (block of proliferation 1 protein) [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ribosome biogenesis protein bop1 (block of proliferation 1 protein) [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0043021 ribonucleoprotein binding GO:0042254 ribosome biogenesis GO:0005730 nucleolus GO:0006364 rRNA processing |
| InterPro families | IPR012953 BOP1, N-terminal IPR019781 WD40 repeat, subgroup IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019775 WD40 repeat, conserved site IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat |
| Orthology group | MCL11658 |
Nucleotide sequence:
ATGCCTCCTTACAAAGCAGGGTTGTTGAAAAGAAAAAATGAGTCCCAAGAGTCAAAAAAC
AGTAATTCAGAAGACAAGAACACCACCAGTGCTGATGAGGGAGAGGAGTTAGTGAAAGGC
TTCCTGGATGATGAGGACGATGCTGCAGACTCTGAGCCTGAGGAGGACGAACACTCAGAC
GGAGAAAGAGATGAAGTTTTGTTTGAAGAACATGATTCAACATTAGGTGATGATGAGCAG
GAAAATGAAACATCAGAAGCTGAATCTTCTGACCTGACCGATTCAGAGGAAGTTGAAGAA
ACTGATGAAGATGAAGGTGACAGTAGTGAGAATGAGGAACAGGTGAGCAGTGACAGTGGA
GCAGACACTGGCATGGCGCCGATAACAACAGGCAGCAGTGATGAGGCAGTTAGGAAGATA
GGAGGCAAGAAGAAAGTAAAACAAGTGACCAAGAAGACACAGGAAAAGAAGAAAAACAAT
AAAACAAGTATTGAAATAATGTCTGCTAAAATACAAGAAGACAAAGTGACAGCACCCGTA
CAACAAAAAGGTGATGAGTACGAGTCTGGAGACACATCGGACGAGGAGGACAGAACTAAC
ACCGTGGGTGACATTCCCATGTGGTGGTACAATGAGTACCCGCATATCGGATACACCTTG
GACGGCGAGAGGATCATCAAGCCACCACAGAGGGACCAGATTGATGAATTCCTTAAGAAG
TGTTCGGATCCTGATTTCTGGCGCACCGTAAAGGACCCACAGACGGGTCAGGACGTTGTG
CTGGCTCCCAGCGACTTGAGATTGCTGGAGAGACTCAGAGCCTCACGCCTGCCTTCCGAC
ACTCACGACGACTATGAGCCGTGGGTGGAGTGGTTCAGTCGCGAGGTGTTGGCGACGCCT
CTGCGCGCCTTCCCAGAACACAAGAGATCGTTCTTGCCGTCTCGCTCGGAGCAGCTCGCC
GTCTCCAAGCTTGTGCACGCCCTTAAGATGGGCTGGACGAAGACCAGAAAGGAGATGGCC
GCAGAGAGGAGGAAGAAGAAGGAGCGTGCCTTCTACGACTTATGGTCGTCGTCGGCCACA
TCTGCGACGGGCGGAGCGCGCGTGTTGCCCGCTCCGAAACGAGCGCTGCCGGGACACGCC
GAGAGTTACAACCCGCCGGCGGAGTATCTGCTGGATAACAAGGAGATGAAGGAGTGGGAC
TCGCTGGCGGAGACCCCTTGGAAACGAAAGTACACCTTCCTACCGCAGAAACACAGCTGC
TTGAGAGAGGTCGAGGCGTTCCCGCGGTTCATTCGGGAGAGATTCCTGCGTTGCTTAGAC
CTGTATCTGGCACCCAGAGCGATCCGTATGAGGCTGACCATTAACGCGGAGGACCTGGTG
CCCAAGCTGCCGTCCCCGCGAGACCTACAGCCCTTCCCTACGGCCGAGGTGCTCCAGTTC
CGAGGACATACGGACGTCGTCCGCAGCTGCGACTTCGACCCCTCGGGACAGTACGTCGTG
TCGGGAAGCGAGGACGGCACTCTCAAAGTGTGGGAGAGCAGTACTGGTCGCTGTGTGCGC
ACGGTGTCCCTGGGAGCGGCCGTGACGCGCGTGTCATGGAGTCCTGCAGCCGCGCTGTGC
CTGGTGGCGGCGGCGGCCGGACCTCGCGCGCTGCTACTAAACGTGCAGGCGGGCGCCGGC
GCGCACCGCGCCGCGCGTGCCACCGATCGCCTGCTGGCCGAGGCGCCTCCGCAGCACGAT
ACTCGCATGGACGAGCGCACGTCGTCGTGTGTGGAGTGGGAGGAGGTGGACGCGACGCAG
TGGGCGCACGGCATCAGGATCTCCATCAAACACTTCAAGCAGCTGGCGCACCTGTCGTGG
CACGCCCGAGGCGACTACCTGGCGGCCACGGTGACGGAGGGCGCATCTCGCGCGGTGGTG
GTGCACCAGCTGTCCCGACGCCGCTCGCAGCTCCCATTCCGACGAGCGTGCGGGCTGGTG
CAGGCGGCCGTGTTCCACCCACGCCGGCCGCTGCTGCTCGTGGCCACGCAGCGCGCCGTC
CGCATCTACGACCTCGTGAAGCAGGAACTGTCCCGCAAGCTGCGACCGGGCGCCCAGTGG
CTCAGCTCGCTGGCGGTGCATCCGGGCGGAGACCACCTGCTGCTCGGCTCCTACGACCGC
AAGCTGGTGTGGTTCGACCTGGAGCTGTCGGCTCGCCCCTACCGCACGCTGCGGGTGCAC
GGGGCGGCGGTACGCGCGGTGGCCTTCCACCCGCGGTACCCGCTGTTCGCGTCGGGTGGC
GACGACGCCTACCTGGTGGTGTGTCACGGCACGGTGTACAACGACCTGCTCACGAACCCG
CTGCTGGTGCCGCTGAAGCAGTTGGCGGCTCCCGCGGCGGCCGGCGCGCTCCGAGTGCTC
GACCTGCGCTGGCATCCTCACCAACCCTGGCTGCTGGCCGCGGGCGCCGACGGCACGCTG
CGCCTGTACTCGTGA
Protein sequence:
MPPYKAGLLKRKNESQESKNSNSEDKNTTSADEGEELVKGFLDDEDDAADSEPEEDEHSD
GERDEVLFEEHDSTLGDDEQENETSEAESSDLTDSEEVEETDEDEGDSSENEEQVSSDSG
ADTGMAPITTGSSDEAVRKIGGKKKVKQVTKKTQEKKKNNKTSIEIMSAKIQEDKVTAPV
QQKGDEYESGDTSDEEDRTNTVGDIPMWWYNEYPHIGYTLDGERIIKPPQRDQIDEFLKK
CSDPDFWRTVKDPQTGQDVVLAPSDLRLLERLRASRLPSDTHDDYEPWVEWFSREVLATP
LRAFPEHKRSFLPSRSEQLAVSKLVHALKMGWTKTRKEMAAERRKKKERAFYDLWSSSAT
SATGGARVLPAPKRALPGHAESYNPPAEYLLDNKEMKEWDSLAETPWKRKYTFLPQKHSC
LREVEAFPRFIRERFLRCLDLYLAPRAIRMRLTINAEDLVPKLPSPRDLQPFPTAEVLQF
RGHTDVVRSCDFDPSGQYVVSGSEDGTLKVWESSTGRCVRTVSLGAAVTRVSWSPAAALC
LVAAAAGPRALLLNVQAGAGAHRAARATDRLLAEAPPQHDTRMDERTSSCVEWEEVDATQ
WAHGIRISIKHFKQLAHLSWHARGDYLAATVTEGASRAVVVHQLSRRRSQLPFRRACGLV
QAAVFHPRRPLLLVATQRAVRIYDLVKQELSRKLRPGAQWLSSLAVHPGGDHLLLGSYDR
KLVWFDLELSARPYRTLRVHGAAVRAVAFHPRYPLFASGGDDAYLVVCHGTVYNDLLTNP
LLVPLKQLAAPAAAGALRVLDLRWHPHQPWLLAAGADGTLRLYS