| New model in OGS2.0 | DPOGS202350 |
|---|---|
| Genomic Position | scaffold2163:+ 20138-24628 |
| See gene structure | |
| CDS Length | 1338 |
| Paired RNAseq reads | 714 |
| Single RNAseq reads | 2032 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014337 (4e-93) |
| Best Drosophila hit | CG2263 (3e-170) |
| Best Human hit | phenylalanyl-tRNA synthetase alpha chain (1e-165) |
| Best NR hit (blastp) | phenylalanyl-tRNA synthetase alpha subunit [Bombyx mori] (0.0) |
| Best NR hit (blastx) | phenylalanyl-tRNA synthetase alpha subunit [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0009328 phenylalanine-tRNA ligase complex GO:0004826 phenylalanine-tRNA ligase activity GO:0005737 cytoplasm GO:0000049 tRNA binding GO:0006432 phenylalanyl-tRNA aminoacylation GO:0005524 ATP binding |
| InterPro families | IPR002319 Phenylalanyl-tRNA synthetase IPR006195 Aminoacyl-tRNA synthetase, class II IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit |
| Orthology group | MCL14651 |
Nucleotide sequence:
ATGATAGTATCTGAACCGGTGAAAAGTACGAAATGGGAACTTACGGAAGAGGGGAAGTTA
GTAGCTGAAAACGGAAGTCATGAAGCCGTCTTGTACCGGAGTATTCCTGAAAATGGAATG
TCTCAAGCTGAAGTCATGAAGACCGTGCCAAATGCAAAAGTTGGATTCAGCAAAGCAATG
TCATCTGGATGGATAGTTTTAGATAAATCTGGAGGAACGCCTCTTGTTAAGAAGAAGGTT
GACTTGATAAAAGATACTGTACAAAACCATCTCAATGAGATTAAGAATGGCGTTGACAAT
ATTCCAGATAAAGAGAGAAGTGATTACAAGAAAAGAAAATTACTTCAAGAGATCACTTTC
AAGAGTTTTGTTCTATCAAAGGGACTTCAGTTTGCGACAACTATAAAGAAACTGGAGACC
GATATAACAAGTGAAATGCTTATGACTGGGGCGTGGAAGGATTTGCAGTTCAAGCCCTAC
AACTTTGATGCTCTCGGTCAGCCGCCCGACTCGGGTCACCTCCACCCTCTACTGAAAGTC
AGATCCGAATTCCGTGAAATATTCCTAGAAATGGGTTTCACAGAAATGCCAACAAATCGT
TATGTGGAGAGCTCCTTCTGGAATTTCGATGCTCTGTTCCAACCCCAGCAACACCCGGCC
AGAGACGCCCACGACACATTCTTCATTTCCTCACCAGCTGTTTCATCACAGTTTCCCATG
GACTATTTGGAGAAAGTCAAAAAGGTTCACAGTGAAGGCGGCTATGGCTCTCAGGGTTAC
CGTTATACTTGGAAGCTGGAGGAAGCTCAGAAGAACCTCCTCCGGACTCACACGACGGCC
GTCAGCGCTCGGACGTTGTACAAACGAGCAGACAGACACACTCCCATCAAGTGCTTCAGT
ATAGATAAGGTGTTCCGCAACGAGACCCTGGACGCGACCCACCTGGCGGAGTTCCACCAG
GTGGAGGGAGTCATCGCTGACAAGGACCTGGGCCTGGCGGACCTCATCACAGTCCTGGAC
GACTTCTTCAAACGACTCGGCTTCGACAAACTGCAGTTCAAACCGGCATACAACCCGTAC
ACCGAACCCAGTATGGAGATATTCGCTTACCATAATGGTCTAGAAAAGTGGATAGAAATT
GGAAATTCTGGTGTGTTCCGACCGGAGATGCTTCTACCCATGGGCTTGCCTGAAGATGTC
AATGTAATCGCATGGGGCTTGTCCCTCGAAAGACCTACTATGATCAAATATGGTTTGAAT
AACATCAGAGACCTCGTGGGACCCAAGGTGGACCTGCAAATGGTTCAGAGCAACCCTATA
TGCAGGCTCGACAAGTGA
Protein sequence:
MIVSEPVKSTKWELTEEGKLVAENGSHEAVLYRSIPENGMSQAEVMKTVPNAKVGFSKAM
SSGWIVLDKSGGTPLVKKKVDLIKDTVQNHLNEIKNGVDNIPDKERSDYKKRKLLQEITF
KSFVLSKGLQFATTIKKLETDITSEMLMTGAWKDLQFKPYNFDALGQPPDSGHLHPLLKV
RSEFREIFLEMGFTEMPTNRYVESSFWNFDALFQPQQHPARDAHDTFFISSPAVSSQFPM
DYLEKVKKVHSEGGYGSQGYRYTWKLEEAQKNLLRTHTTAVSARTLYKRADRHTPIKCFS
IDKVFRNETLDATHLAEFHQVEGVIADKDLGLADLITVLDDFFKRLGFDKLQFKPAYNPY
TEPSMEIFAYHNGLEKWIEIGNSGVFRPEMLLPMGLPEDVNVIAWGLSLERPTMIKYGLN
NIRDLVGPKVDLQMVQSNPICRLDK