| New model in OGS2.0 | DPOGS213072 |
|---|---|
| Genomic Position | scaffold889:+ 5919-11307 |
| See gene structure | |
| CDS Length | 1905 |
| Paired RNAseq reads | 1671 |
| Single RNAseq reads | 4209 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007689 (0.0) |
| Best Drosophila hit | ND |
| Best Human hit | 60 kDa SS-A/Ro ribonucleoprotein isoform 2 (2e-31) |
| Best NR hit (blastp) | PREDICTED: similar to ribonucleoprotein [Nasonia vitripennis] (3e-71) |
| Best NR hit (blastx) | PREDICTED: similar to ribonucleoprotein [Nasonia vitripennis] (2e-73) |
| GeneOntology terms | GO:0003723 RNA binding GO:0005515 protein binding GO:0030529 ribonucleoprotein complex |
| InterPro families | IPR008858 TROVE |
| Orthology group | MCL16130 |
Nucleotide sequence:
ATGACAGCATCGTCAAATCTTGATCCGCAACTCCGAAACCAAATAACAAGATATTTGCAC
ACTGGAAATGAGCTCCCAAAGTATTATCCGGGATGTTGGACATCTCATAAATATTTTGAA
GTTGATAAACTTAAAGCAATTGAAGAAGCCCTACAGACTTCGCCAAATAATGTAGAAGTC
GTTAATTTAATTTTGAAGGCTTATAAAGATGGATGGTACACAAGATTTGAAACTATCGCC
TTTGCTCTGACCAAATGTCTCCTTGTCGGATCTGCTACTGTAAAAGAAGCCACTTATAAA
GCTGTAACTGAAATATGTAATACCCCTGAGGAAATGATGCTCTTCAACAAATATACGAGG
CTTTTGCAAACAGGAAATGGCCGAGGTTGGTGTAAGAGCGTGAAGGAGTGGTATATAAAG
AAAGATCCAATGGAATTAGCAAAAGAAATAAGCAGAGTACGAGCGAGGCATGGCCGCTCC
CATAAAACATTGCTTCGGAAGTCGCACATGAAGGTTCCAGAAAATGATGCTATGAGAGAT
GCAGTCATAAAATATGCTATATTCGGTCTCAAACGAGCTAAGCAGCTGGTGGGTAATGTT
GAAGAAACTAAACCAATATTTGAATACATACAAAAAGTTGAAAACATGCGTCACTGTGAG
GATCCTGAAGCCGCAGCCACTATTGCTGCTGAGAATCAGTTTACCCTTGATCATGTGCCT
GGCCACTTGCTAACTGCTCAGGAAGTTTGGAATGCTATACTGCCCCAATTCTCAATGCAA
GAATTGCTGTACAATATCCAACGCATTCACAACATGGGTTTCCTTACAGCTCACTCGACT
ACCACGGTCATACTTATCTCACTCCTTAACAATCAGGATCTCATTAAAAAATCGAAAATT
ACTCCGATCGAAGTCTACATTACAATGTGCAACTATAAAAAAAAGACGAGACCATTAAAA
TTTGAAAAAGCTAAAGTGGCACTCGAGAAGCAGACGCGTCGTAGGACCCGTCAAATATTC
GACGCTCAGAATGAGTTGTGGGAGTGGACGGTAACTCGGCGACATCCTAAAGAAATCAAG
CATTGGGGCATTGACCAGCCTCCTAACCAACTGGTGCTCGCTGCTCTCAACAAGCTGATA
GATCAAACATGGCTCCTCACACCGCCCACCAACAAACGCTATCTGATTACTTTGGATATG
AGACACCATATGTTCAAAGGTCGTCATTTCTGCAAGAACTACGTAGTCCCCCGAAAGGGT
AAAAAGACAACAGTTAAAAGTACACCGGGGGCGAGCGGTGACGTAGACACTGAGAAACAG
GAAAGCAAGAAACATTTATATGCCGAGTGTTTCTATAATAAACACGTAACCCCTGGTCAT
GTTGCTATAATTATGGCCCTACAACTTCTGAAACGTGAGAAGAACGCTAAGTTGGCCGTG
TTCACTGAAGACGGAATACAATTAGTGTCCATAGAACGAAACTTCAGTAACATTGAAGAG
GCTGAATTTGTTTTGAGGAAAGCCAACCTGGGCCGTGTACAGTTAGACGCTCCAATGGAA
TGGGCCAACAAAACCAAACAGAATTTCGACGTTTTCATCAATATGGTGGATCGCACCACT
CGCTACATGGAGCTGGAGTTGGCTGCGCGCGGTGGTCGCGGTCCCGGGGGACGGTATGGA
CCACCGCCCTCACCAACCAAAGAGATAGTCGACCATTGTCCCATACGAGCACTAGAGAGA
TACAGAGCTCAAAACGTACAAGAGGCCAAGTTAATCGTAATGTCTCTGGCTTCACACCGA
GTGGCCACCACAGATGGCACTCACGAAGGCGTTTTGGACATCATAGGCATTGATGAACAC
GTGCCCAAAGTTATTGATGCTTTCACACTCGGACAATTTCTGTAA
Protein sequence:
MTASSNLDPQLRNQITRYLHTGNELPKYYPGCWTSHKYFEVDKLKAIEEALQTSPNNVEV
VNLILKAYKDGWYTRFETIAFALTKCLLVGSATVKEATYKAVTEICNTPEEMMLFNKYTR
LLQTGNGRGWCKSVKEWYIKKDPMELAKEISRVRARHGRSHKTLLRKSHMKVPENDAMRD
AVIKYAIFGLKRAKQLVGNVEETKPIFEYIQKVENMRHCEDPEAAATIAAENQFTLDHVP
GHLLTAQEVWNAILPQFSMQELLYNIQRIHNMGFLTAHSTTTVILISLLNNQDLIKKSKI
TPIEVYITMCNYKKKTRPLKFEKAKVALEKQTRRRTRQIFDAQNELWEWTVTRRHPKEIK
HWGIDQPPNQLVLAALNKLIDQTWLLTPPTNKRYLITLDMRHHMFKGRHFCKNYVVPRKG
KKTTVKSTPGASGDVDTEKQESKKHLYAECFYNKHVTPGHVAIIMALQLLKREKNAKLAV
FTEDGIQLVSIERNFSNIEEAEFVLRKANLGRVQLDAPMEWANKTKQNFDVFINMVDRTT
RYMELELAARGGRGPGGRYGPPPSPTKEIVDHCPIRALERYRAQNVQEAKLIVMSLASHR
VATTDGTHEGVLDIIGIDEHVPKVIDAFTLGQFL