| New model in OGS2.0 | DPOGS212842 |
|---|---|
| Genomic Position | scaffold98:- 18779-32975 |
| See gene structure | |
| CDS Length | 699 |
| Paired RNAseq reads | 271 |
| Single RNAseq reads | 766 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000787 (2e-76) |
| Best Drosophila hit | Pox meso (3e-60) |
| Best Human hit | paired box protein Pax-1 (9e-60) |
| Best NR hit (blastp) | pox meso [Tribolium castaneum] (1e-67) |
| Best NR hit (blastx) | PREDICTED: similar to Paired box pox-meso protein (Paired box mesodermal protein) [Apis mellifera] (2e-66) |
| GeneOntology terms | GO:0001501 skeletal system development GO:0001756 somitogenesis GO:0003677 DNA binding GO:0005634 nucleus GO:0007275 multicellular organismal development GO:0007389 pattern specification process GO:0043367 CD4-positive, alpha beta T cell differentiation GO:0043374 CD8-positive, alpha-beta T cell differentiation GO:0045449 regulation of transcription GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0048538 thymus development GO:0060017 parathyroid gland development GO:0060349 bone morphogenesis |
| InterPro families | IPR001523 Paired box protein, N-terminal IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR009057 Homeodomain-like |
| Orthology group | MCL12833 |
Nucleotide sequence:
ATGCTGCTGACCGGCATGGACGGGAAGGAGTACGGGGACACGCCCGGGGCCGCGGCGCCG
GCCTCCGGGTACGGCGGACCACACGATCCGAGCGTGAGCGGTATGCCGCCTCCGGGGATG
GTGGGCGCGCAGCAGTACGGGGAAGTCAACCAGCTGGGAGGGGTGTTCGTCAACGGACGG
CCGCTACCGAACGCCGTCAGGCTCAGGATCGTGGAGCTCGCTCAGCTCGGCATCAGACCG
TGCGACATCAGTCGTCAGCTGCGCGTGTCTCACGGCTGCGTGTCCAAGATCCTGGCGCGG
TATCACGAGACGGGCTCTATACTGCCGGGAGCCATCGGGGGCTCCAAACCGAGGGTCACC
ACGCCCAAAGTCGTGTCCTACATCAAGCAGTTAAAAGCGAAGGACCCGGGCATCTTCGCC
TGGGAGATTCGTGACAGACTGCTGGCCGACGGAGTCTGTGACAAGTACAACGTGCCCTCA
GTGTCCAGCATCAGTCGCATCCTCAGAAATAAGCTGGGTGGTCCGCTGTACCCCGTGCCT
CCGCTGTACCCCGTTCCACCTCAGAGATGCTGGCCTCTGCACCAACCCTACGACTATTAC
GTGTACTTGCAGGGTCGCCAGCAGGCCGGTGTGCCTCACGGACTGACTCACGGACACGGC
CCGGCCGTCCCGCACCACGCACACACACACGCTCTATGA
Protein sequence:
MLLTGMDGKEYGDTPGAAAPASGYGGPHDPSVSGMPPPGMVGAQQYGEVNQLGGVFVNGR
PLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYHETGSILPGAIGGSKPRVT
TPKVVSYIKQLKAKDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNKLGGPLYPVP
PLYPVPPQRCWPLHQPYDYYVYLQGRQQAGVPHGLTHGHGPAVPHHAHTHAL