| New model in OGS2.0 | DPOGS212830 |
|---|---|
| Genomic Position | scaffold98:+ 38638-40923 |
| See gene structure | |
| CDS Length | 1158 |
| Paired RNAseq reads | 1191 |
| Single RNAseq reads | 3474 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000778 (2e-104) |
| Best Drosophila hit | pinin, isoform A (4e-35) |
| Best Human hit | pinin (3e-20) |
| Best NR hit (blastp) | pinn [Aedes aegypti] (1e-53) |
| Best NR hit (blastx) | pinn [Culex quinquefasciatus] (7e-55) |
| GeneOntology terms | GO:0030057 desmosome GO:0006396 RNA processing GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071013 catalytic step 2 spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR006786 Pinin/SDK/MemA protein |
| Orthology group | MCL13810 |
Nucleotide sequence:
ATGGTGACCGAAGTAGCAATATCATTTAATACGTTACGTGCGCAGTTAGAGAGTGAAAAG
AGTAATTTGTTTAAAATAGATGAAAATATTAAGAAAATAGTGCAAACCTCAGGGCGGTTT
ACTGACAGATTTAATGGTACGGGGGATTATGCACGAGGTGGCCTTAGAGGCGCGGCGAGA
AATAACTACTCAGATTTAAGCAATCACTTTAAAAATGACGACCCTCTGAAGCGCAAACAT
GAAACCAAAACCGTGTTTAGTAGATTGTCAGCAAGGGTGCAAGATAGTGATGGTGAGGAG
GAAGTGCCTGACAAACGAGCCCGTGTTCATTCTACTGTTTGTAAGGAGCTCCCAACTCGC
GCGGCCGTGTTGCGGGCACAGGGAGACGATGAACAGGCTCGCACTCGAAACAGAAGAATA
TTCGGTTCACTTCTCGGAACACTTCAAAAGTTCAAACAAGAAGAAATTGTTTTACAGACC
AAGGAGGAGAAAAAGGCCCAAGTAGAAAAGAAAATTGAAGAACAGGCAAAGTTAGAAAAA
GAAAGAGAACAGAAACAGAGAAGAACTCTGTTTGCTGAGAGAGAACACAAGAAGGCCACA
ATTAAAGCTTTAGAAGCCAAGATGGCCCGAGTTCAGGAGTTTGAGAAATGGGAAGCTTCA
CAGCAGTGTCTCGGCAACTTCATAGTTACTAAAGCAAAACCACATGTATATTGGTTACCA
AAGAAACTGGATGAAAAGGCCACAGAGAAGTTGAATTCCAGCAGAAAGTTTCATGAAAAG
ACAATGTCACTGAAACGCCAAGAACTCCAGGAAGAACTGCTGAGGATAGAAATGAAAGTT
CTCCGTCCCCGAGGTCCTGGGGCTAAAGAAAATTATCAACAGAACAACACGCAGACGAAA
CAGGAGGAAAGACAAGAGGAGCCAGAGGATCGCAACAAGAGGAGAGACAAGTTTGCTATT
GACGAGGATGAAGTATATGATAGTGATGGAGATGAGAGGCAGGACGATAGTAGGGAAACC
AACAACATCACCGCAGAAGAAACCAACATGGACACCAACACAGAGAACGCCACAGTAGAA
TGTGAAGAGAAAGACACCAAGGAAACAGAAATAACACAAGAGGTGGTTCATTCGGAGGAC
CACAAGGAACATTCCTAG
Protein sequence:
MVTEVAISFNTLRAQLESEKSNLFKIDENIKKIVQTSGRFTDRFNGTGDYARGGLRGAAR
NNYSDLSNHFKNDDPLKRKHETKTVFSRLSARVQDSDGEEEVPDKRARVHSTVCKELPTR
AAVLRAQGDDEQARTRNRRIFGSLLGTLQKFKQEEIVLQTKEEKKAQVEKKIEEQAKLEK
EREQKQRRTLFAEREHKKATIKALEAKMARVQEFEKWEASQQCLGNFIVTKAKPHVYWLP
KKLDEKATEKLNSSRKFHEKTMSLKRQELQEELLRIEMKVLRPRGPGAKENYQQNNTQTK
QEERQEEPEDRNKRRDKFAIDEDEVYDSDGDERQDDSRETNNITAEETNMDTNTENATVE
CEEKDTKETEITQEVVHSEDHKEHS