New model in OGS2.0 | DPOGS213893  |
---|---|
Genomic Position | scaffold5838:+ 4115-7622 |
See gene structure | |
CDS Length | 1116 |
Paired RNAseq reads   | 236 |
Single RNAseq reads   | 750 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003268 (1e-07) |
Best Drosophila hit   | convoluted (7e-95) |
Best Human hit | carboxypeptidase N subunit 2 (1e-20) |
Best NR hit (blastp)   | PREDICTED: similar to Acid labile subunit CG8561-PA [Tribolium castaneum] (9e-110) |
Best NR hit (blastx)   | leucine-rich transmembrane protein, putative [Pediculus humanus corporis] (3e-106) |
GeneOntology terms    | GO:0035151 regulation of tube size, open tracheal system GO:0007424 open tracheal system development GO:0005515 protein binding GO:0008045 motor axon guidance GO:0035159 regulation of tube length, open tracheal system |
InterPro families    | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
Orthology group | MCL16372 |
Nucleotide sequence:
ATGGCTCCAACGCTATTAATGTTTCTGGTATTATTACCAGTGTTGAGATCAGAATATATC
CCCCCCGGCCCGGCATATCCCTGTCCTAAAGATACCGATAGACAGCTGTTATATCCTTGC
ACATGCCAACAAGGGACTGATGATGGATTGTTCATAAAATGCGAGAACACAGGGTTGGCG
ATCATGAGCGTTGGACTCGGTAACATAGCCGGCTTAGGGCTGCCCATCGAAAGGTTGGAA
ATACGTGAATGTAAAATTGTGCACCTATTCGGACCGTTATTACATAGATCCAGTGTGAGA
GTGTTACACATCATCGACACACCAATAAAAACCATAGACGAGCTCGCGTTTGCCGGTGTG
AACAAGACCTTACAAGAGATATACATGACTAATACAAGGATATCACAGTTTCCCAAAGAA
GCATTTAAGATCCTAGGCAATCTAACGACTCTATCTATAGATGGGCACCTGATGACGTCA
CTGTCCAAGGATATTTTTGGCGGCAGCCTAGCTGTTGGCAAGCTGGAGAAGCTACATCTC
GTCAACGGCTTGTTAAACGACATACCAGTAGAAGCCTTTCAAAATTTAAAGAAGCTTAAA
ACGCTCGATCTTCACGGTAATAAATTAGTGACGCTGAAGAGGAATCAGTTCAAAGGACTC
AGAGACACCGAGGTGTTGGACTTGAGTTACAACAATCTGACAAAGCTAGACGGAAGTCAC
ATAGGGGACCTCACTAAGCTGGGTTGGTGTAACGCCAGCCATAACAGTCTACCGGACATA
CCGAGGGGTATGTTCGCGAGGAACACTGTCATAAAGGTTGTTCATTTGGACAACAATAAC
ATCAAAAAGCTGGACGTGAACAGCTTCAGAGGAATGAGGTTTTTAAGACGACTCTACCTT
CAAGACAATCAGATATCTGACGTTGGTCGGGGAACCTTCTCATCGGTGACTCGTATAGGT
ACAGTGGACCTGGCAAGAAACCTTATCACCAAAGTGGATTATCAAATGTTCCAATCTGTA
AAATACGCTGAGGTGTGTACAGCTACTAATATCATAAATACCAAACTCAGTGAGGCTGTA
TGTGTGTTTGTTACTCATTTACATAAAATATGCTAA
Protein sequence:
MAPTLLMFLVLLPVLRSEYIPPGPAYPCPKDTDRQLLYPCTCQQGTDDGLFIKCENTGLA
IMSVGLGNIAGLGLPIERLEIRECKIVHLFGPLLHRSSVRVLHIIDTPIKTIDELAFAGV
NKTLQEIYMTNTRISQFPKEAFKILGNLTTLSIDGHLMTSLSKDIFGGSLAVGKLEKLHL
VNGLLNDIPVEAFQNLKKLKTLDLHGNKLVTLKRNQFKGLRDTEVLDLSYNNLTKLDGSH
IGDLTKLGWCNASHNSLPDIPRGMFARNTVIKVVHLDNNNIKKLDVNSFRGMRFLRRLYL
QDNQISDVGRGTFSSVTRIGTVDLARNLITKVDYQMFQSVKYAEVCTATNIINTKLSEAV
CVFVTHLHKIC