DPGLEAN09768 in OGS1.0

New model in OGS2.0DPOGS208223 
Genomic Positionscaffold1089:+ 4114-12060
See gene structure
CDS Length1776
Paired RNAseq reads  488
Single RNAseq reads  1465
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA006411 (2e-101)
Best Drosophila hit  vacuolar protein sorting 16A (2e-67)
Best Human hitvacuolar protein sorting-associated protein 16 homolog isoform 1 (2e-62)
Best NR hit (blastp)  PREDICTED: similar to vacuolar protein sorting vps16 [Tribolium castaneum] (7e-99)
Best NR hit (blastx)  PREDICTED: similar to vacuolar protein sorting vps16 [Tribolium castaneum] (5e-94)
GeneOntology terms



  
GO:0007041 lysosomal transport
GO:0006886 intracellular protein transport
GO:0008057 eye pigment granule organization
GO:0005829 cytosol
GO:0000046 autophagic vacuole fusion
InterPro families

  
IPR011046 WD40 repeat-like-containing domain
IPR006926 Vps16, N-terminal
IPR006925 Vps16, C-terminal
Orthology groupND

Nucleotide sequence:

ATGTCAGCTTTATTAACAGCAGATTGGTTTCATCTAGATTCCTATTACAGGAAATTTGAT
TTGTATAACATGGTATGGTCAATGGACGAAGGCCTTGGCAACATGATTGTTAGTGGAGCA
CAGTATGGAGGTCCTATTGCTGTTGTTAGAGACAGAAAACAGTTTGTAAGGATTGTGACG
ACAGCTAAGCCCGTCATCACTATATATAACTGTGTTGGGAACATTATATCAAAGATTCTG
TGGAACAATGGAGTTTTAATACACATGGGCTGGTCGGACGGTGAACAGCTTCTATGTATT
CAAGAGAGTGGTGATGTTTTGATATATGATATGTTTGGGGCATACCAAAAGACATTCAGT
TTAGGGCAAGAAGTTAGAGATACAAAGGTCTGTAAAGCCCAACTATTTTCAAATCCCCAC
GGTAAAGGCCTCGCTGTCATAACAACAACAAACCGGATATTCTTATTGAGTAATGTATCT
GAACCTAAAATAAGAACAGTGCCTGAAATACCTAGAGCGAATGAACCGATCAGCTGTTGG
TGTGTCATCAGTTCTGACCCACGAGTTGCACCAAATATTGCTGTACTCGTATGTAGGGAT
AAGGAAGTGTATAGATGTCAGCTCGGTGAATCCAGACCTATACTTATGCGACCGGATATA
ACAAATGCCTTTACCCTAATTCTAACAATAGTGCCATCAGATAACGGTCGTCATGTAGCA
CTGTTCACTGACTCTGGTTTCCTCTGGCTCGGATCATCAGACTTCAAGAGTAAATACTGT
GAGATTGACACAGAGTATATAAAACAACCCAAAGAGCTGCTATGGTGTGGATCCCAAGCA
GTGATAGCACATTGGGATGACACAATGTGTATATACGGCCTTAATGGGACATCCGTGAAG
TACCCCTACGACGGACCCTTCCACCTCATACAAGAAAGTGACTGTGTGAGAGTTATATCG
GAAATGACACACGAGTTGATACAAAAAGTACCAGTAGTAGTGGAAAAGATATTCAGGATC
AATAGCACAGCGCCCGGATCGTATTTGGTTGAAGCTTCGAAACAATTCCAGCTGACGATA
GTTAACTTCAAACTGGCTCATTCTCTGTACATAAAGTACTGCGCGAGTCACAACAGAGAG
GCTCTGCGGAAGGTTTACGTGCAGGAGGACGATTTCCACGGACAGGCGACCACACACGTC
AGGGACGCCATCGAACAGAGCAATCCCGGAAGTGTAGAGGCATCCCTGATATCCGCTCGG
GAATGTTACAGGAAGGGCAGGAACGATCTTGGAGTTTCGATATGCGAAGAAGCTCGCAAG
CTCTGCAAGCAGCAATCAAGTCTGCAAGAGACGTATGGAGAGAGTTTTGTTGGACTCTCA
CTTCACGACACCGTGAAGAAACTTCTAGAACAGGGGGAAATAAAATTGGCTGATAAACTG
AGATCCGAATACAGGATGCCGGATAAAAGGTACTGGTGGCTGAGAATATTAGTGATGGCG
GATAACTATAAATGGGACGATTTAGAAAAGTTCTCCAAATCTAAGAAATCACCGTGCGGC
TATGAACCGTTCGTGGACGCTTGTCTCAAGTACGGGAAGAACGACGAGGCACTGAAATAT
CTATCGAAGTGCCGGGACGACATCAAAGTCAAATATTACGTCAAGGCCGAATTCTATGAA
GAAGCAGCTCAAGTAGCATTCGAACAAAAGGACGAGAGCGCGCTTTTGTTCGTACAAAAT
AAATGTCCTTCGTGTAATCTTAATAGCAGCCTGTAG

Protein sequence:

MSALLTADWFHLDSYYRKFDLYNMVWSMDEGLGNMIVSGAQYGGPIAVVRDRKQFVRIVT
TAKPVITIYNCVGNIISKILWNNGVLIHMGWSDGEQLLCIQESGDVLIYDMFGAYQKTFS
LGQEVRDTKVCKAQLFSNPHGKGLAVITTTNRIFLLSNVSEPKIRTVPEIPRANEPISCW
CVISSDPRVAPNIAVLVCRDKEVYRCQLGESRPILMRPDITNAFTLILTIVPSDNGRHVA
LFTDSGFLWLGSSDFKSKYCEIDTEYIKQPKELLWCGSQAVIAHWDDTMCIYGLNGTSVK
YPYDGPFHLIQESDCVRVISEMTHELIQKVPVVVEKIFRINSTAPGSYLVEASKQFQLTI
VNFKLAHSLYIKYCASHNREALRKVYVQEDDFHGQATTHVRDAIEQSNPGSVEASLISAR
ECYRKGRNDLGVSICEEARKLCKQQSSLQETYGESFVGLSLHDTVKKLLEQGEIKLADKL
RSEYRMPDKRYWWLRILVMADNYKWDDLEKFSKSKKSPCGYEPFVDACLKYGKNDEALKY
LSKCRDDIKVKYYVKAEFYEEAAQVAFEQKDESALLFVQNKCPSCNLNSSL