| Genomic Position | scaffold5158:- 7942-14193 |
|---|---|
| See gene structure | |
| CDS Length | 3042 |
| Paired RNAseq reads | 809 |
| Single RNAseq reads | 3195 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014395 (2e-44) |
| Best Drosophila hit | ND |
| Best Human hit | piggyBac transposable element-derived protein 3 (3e-31) |
| Best NR hit (blastp) | PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpuratus] (2e-67) |
| Best NR hit (blastx) | PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpuratus] (7e-69) |
| GeneOntology terms | GO:0005044 scavenger receptor activity GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0016020 membrane |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10014 |
Nucleotide sequence:
ATGGTCAGTTTCGATGTACAGTCATTATTCACTAGTATACCTGTTCTTGACTGCATTGAG
ATTGTAAGAGGTAAGTTAAAGGATAACAATATGCCTATAGAATATGCAGAGCTATTAAAG
CATTGCCTAACATCTGGCTACCTCATGTGGAAGGATGAATTCTACATACAAGTAGATGGA
GTTGCAATGGGTTCACCGGTTTCCCCCGTTGTCGCTGACATATTCATGGAGGACTTCGAG
GTGCGAGCCCTTTGCTCTCCTCCTATAAGACCTTTAATTTATAAACGGTATGTAGATGAC
ACCTTCACAATATTAAATAAAAATAAAACATCTGCTTTTCTGAACCATCTCAATTCTATC
AATAGTAAGATTCAGTGTACTATAGAATTGGAGGCAAATAATTCTTTAGCTTTCCTTGAT
ATACTTGTTGTTAGGAATCCTGACAATACTTTGGGACATACTGTTTATAGGAAACCCACA
CATACGGACAGGTACCTCAATGGTTACTCACACCACCACCCTATCCAGTTAGCTACCGTT
GGCAAATCTTTGTTACAGAGAGCCCAACATCTTTGTGATGCTGACCACCTAGAGGCCGAG
CTGCAGCATGTAAAACATGCTCTCACTATCAACAACCTGCCCGTGCCTCGCCAGCATCGC
AAGAAGCACCTGAAGCCACCCACAGTTGAACGACAACCTGCGATACTACCATATGTGAAG
GGAGTTACTGACAGAATAGGCAACATCTTGAAGAAGGTTTCCATTAAAACTATTTACAAA
CCACATAAGAAAGTGAGCCAATTCTTGAGACCAATCAAGAGTAACATTCCTTTACAACAA
GCGGGTGTATACAAACTCGACTGTGACTGTGTCTTGTCATACATTGGACAGACGAAGAGG
AGCATCGGTACAAGGGTTAAGGAACACATCTCAGATATCAAAAACAGGCGCGCGTCGAAG
TCAGCAGTGTGTGAACACACAATGGACAAACCAGGCCACTACATTCGTTTTGATAAACCT
CAAATCCTCGCTCGGGAAGACAAGTATATACCGAGATTAATTCGCGAGGCTATTGAAATT
AAAAAACATCCCAATTTCAATAGAGAAGATGGCTGGAATCTATCAAACACCTGGGACCCC
GTTCTTAAAAATATAAAATCCCATGTCCGAAACCACACCGCAGGACCTCAAGACACCGTG
AGCGCATTCTGCCGGCATCCAGAGCGGTACGCCAGAAAATTAAGAAATCGATGGCGTATA
GTCTTGACATCAACGAAGCTAGTGGCCCGGGTGGCATTCCAGTTCCATTTCAATTGCCTA
CGTATGAGCGAGGGGTGGGAATTAGGAGAAGGTAGGAAAGGGTGGGAACAGGGAAAGGAC
AACGACGACGAAACTAGAGGGTGGTACTTCCCCGGTCGAGCCAGAATATGGTCACAGTGT
AGTTACTTTACCACAGCTAGGCTCTACCACCTCAGAAATGATGAGTTAAATTGCAGGTGC
AGCGACGAGAAGACTTCGCCTAATCGCGCAAGTAAAATTATTGCTTTAGTGCCGAATGAA
CATGCACCTTCCGATGCTAGCGAAATATCAGATTCGGAAACTGAATTGCATGATGCACGT
ACTAATTCTTCCACCCCCCTGTCTTCTCCTGCACCATCTATTGCATCTTCCCTTGCTAAC
ATAACAATAGATACATCCGACGATGAAGAATTACACTCCGAAGATGCTGATATTATACCA
GATTCTATCGTGCGTGAAATTGGCGAGTCCATTTATGAAAATGTTCCATCCCTATCTGCT
ATTCCTTCATTGCCTGCAACGCCTATAACACCAATAGCTTCTTCATTAGCACCCCGAAAA
ACAAGATCTAGGAAACCACCCACAGTCAAATCCAAAAGACCAAAAAAAAACAAAAAAATT
CAGCTGACTTACAATTGGAGAGTAGCTCAGTTCCGTCACCAAGCGACAATAGAAGAGGAT
GAGGAGTATGATTACATAGACCTGCCAGAAGATGATTCACCTTTGAGTTTCATTCACCTT
TTTTTTTCTCAAGATATGTTTACTAGTATCGTAGAGCAGACAAACTTATATTCAGTTCAA
CAAACTGGCAAGTCAATTCAACTAACAGACGAAGAATTTAGAGACTTTTTAGCCATCCAT
ATACTTATGGGTATTGTTGTAATGCCTTCATATCTTGATTATTGGTCAGAAAAATTTAGA
TATGGTAATGTCGCAGATATAATGTCTTTGAAAAGATATCAGCTGATACGAAGACATTTA
CATTTTATTGACAATACAATGGACGATGGAGACAAATATTTTAAAGTTCGTCCAATCATA
GAGAATTTACGACAAAATTGTCTGAAACAACAGAAAAAGGAGACAAAATTTAGTATAGAT
GAAATGATGATAGCATATAAAGGGACTAAGGCCGGTAAAAGAAAACAATACATGAAAGAT
AAACCTAACAAATGGGGATTTAAAAATTATGTAAGGGCCGGAGCTTCCGGAATAATTTAT
GATTTTGTGCTGTATGGAGGTGACGATACTTTTCGCAACCACAAGTTCACTGAAGAAGAA
TTGTCTCTAGGTTTTGGTGCTCAGGTGGTTATAGCATTATGTCAAAGTATTTGTCAAAAA
CCATCTTTCGTGTTTTGCGATAACTTTTTTTCTTCACCTGAGTTGCTATTTATTCTCCGA
GAAAACTATGGTGTTTTTGCCTTAGGCACTATTCGAGGCAATCGCCTTCGAGGAGCAGAA
AAAGTTTTACCTACTGAAAAAGCCATGAAAAAGAAACCTCGAGGACATTTTGTAGAAGCT
ATATGTGATAAAAACCGCTTAGCTGTTGTTCGTTGGAATGATAATAAGGCTGTCACATTT
ATTAGTTCCTTTGTAGCAAGTGAGCCTATAGAAAAAATACGCCGATATTCCAAAGACGCA
AAAGCCAAAATCGATGTCCATGCTTATGCTTTTTGGGTGGGCGATGGAAACGATGACCAC
TTTGGCGAGGAAACCACACAGAACACGACCATGGGGATCTAA
Protein sequence:
MVSFDVQSLFTSIPVLDCIEIVRGKLKDNNMPIEYAELLKHCLTSGYLMWKDEFYIQVDG
VAMGSPVSPVVADIFMEDFEVRALCSPPIRPLIYKRYVDDTFTILNKNKTSAFLNHLNSI
NSKIQCTIELEANNSLAFLDILVVRNPDNTLGHTVYRKPTHTDRYLNGYSHHHPIQLATV
GKSLLQRAQHLCDADHLEAELQHVKHALTINNLPVPRQHRKKHLKPPTVERQPAILPYVK
GVTDRIGNILKKVSIKTIYKPHKKVSQFLRPIKSNIPLQQAGVYKLDCDCVLSYIGQTKR
SIGTRVKEHISDIKNRRASKSAVCEHTMDKPGHYIRFDKPQILAREDKYIPRLIREAIEI
KKHPNFNREDGWNLSNTWDPVLKNIKSHVRNHTAGPQDTVSAFCRHPERYARKLRNRWRI
VLTSTKLVARVAFQFHFNCLRMSEGWELGEGRKGWEQGKDNDDETRGWYFPGRARIWSQC
SYFTTARLYHLRNDELNCRCSDEKTSPNRASKIIALVPNEHAPSDASEISDSETELHDAR
TNSSTPLSSPAPSIASSLANITIDTSDDEELHSEDADIIPDSIVREIGESIYENVPSLSA
IPSLPATPITPIASSLAPRKTRSRKPPTVKSKRPKKNKKIQLTYNWRVAQFRHQATIEED
EEYDYIDLPEDDSPLSFIHLFFSQDMFTSIVEQTNLYSVQQTGKSIQLTDEEFRDFLAIH
ILMGIVVMPSYLDYWSEKFRYGNVADIMSLKRYQLIRRHLHFIDNTMDDGDKYFKVRPII
ENLRQNCLKQQKKETKFSIDEMMIAYKGTKAGKRKQYMKDKPNKWGFKNYVRAGASGIIY
DFVLYGGDDTFRNHKFTEEELSLGFGAQVVIALCQSICQKPSFVFCDNFFSSPELLFILR
ENYGVFALGTIRGNRLRGAEKVLPTEKAMKKKPRGHFVEAICDKNRLAVVRWNDNKAVTF
ISSFVASEPIEKIRRYSKDAKAKIDVHAYAFWVGDGNDDHFGEETTQNTTMGI