| New model in OGS2.0 | DPOGS214575 |
|---|---|
| Genomic Position | scaffold207:- 197315-202193 |
| See gene structure | |
| CDS Length | 1188 |
| Paired RNAseq reads | 456 |
| Single RNAseq reads | 1396 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005143 (5e-101) |
| Best Drosophila hit | Trc8, isoform D (8e-09) |
| Best Human hit | RING finger protein 145 isoform 1 (1e-09) |
| Best NR hit (blastp) | hypothetical protein LOC100141687 [Tribolium castaneum] (2e-102) |
| Best NR hit (blastx) | hypothetical protein LOC100141687 [Tribolium castaneum] (6e-97) |
| GeneOntology terms | GO:0046872 metal ion binding GO:0016021 integral to membrane GO:0016020 membrane GO:0008270 zinc ion binding GO:0005515 protein binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR018957 Zinc finger, C3HC4 RING-type IPR001841 Zinc finger, RING-type |
| Orthology group | MCL18515 |
Nucleotide sequence:
ATGGGTATGATTTCAAGAGTACGTGGTAGAATAAGGAGTGATTCTTTCTCGAAGATTCAT
AACAATAAATCTGAGGACAAATTAGCGAACATTGTGTGGCTCATCTCGTTAGTGTTAGTG
CTGCCATACTGGGCACCACGGGGATTGCTTGTGGCGCTGGGAGGCGCGTGGCTAATGGCA
GCATACACCTGTCTGGTGCTGCCCGTTCTAATATCAGCGAACTACCGCTATCCAGCGAGA
TGGTACCCGGCCGTCGCAAAATTAGTCCGGAGACTAGCTCGTCGTCTTCGGGCACCAACA
GCCTGTTTGTTGGGAGTACTGAAGACCGCGTACGCTCCAGTAGATCGAGCTGAGAGACTG
TTCTTGCAAATGAACAATCTCTCAACTATGGTCAGCCAGCTGTTAATATTTACCGCCTGC
GATAGACTTCTCGTGCTGCAGGGAAGGCTTACGTGTCTATACTCGCTGATGTTCTACAAC
GTCGTCACTTATTCCGTCAACTATGTGAAAGAAATCTGCACCAAAGAAGACTGGTCTCCA
TACGTGAATGTCACCCGGCACTCCCGCGTCAAACACCTGGCCATGTCTGCCACCAAGATC
GTATTAGAATGGACGAAGGCTGTTACCTTCATAGTGACCATGACATTCATCCTTCTGACC
CTCGGACTTGAACAGGGCTTGGAGTACTTCCGTCCGAACACTCTTTATACGCTCATCACT
GGTACATTCTATCTCCTCTCAGAGAAGACGTTCCTGGAACTATGGCCACTTGCTTTATCT
GCTTTGAAATTGGAGAGTCTTGAGGGTATGGAGGTTTTGTACTGTGGGGTCTGGTCCAGA
GCCATCACCACCATGATAGCGGTGCCTTTGGTTCCAGCTCTCGTGTGGCATGAAAGGTTT
AGGTTGGCGTTACTAATACTATATATTTGCGTTATAGTCCATGGAAGGCATAGGTTGGGC
GAAGAGTTGCTGAAGTTAAACGAGGCTCAAGGGTCTCTAGCAAGGTTTAGGCGTGCAACC
GCCGAAGAAATATCAACGCTAGAGGATGTTTGCGCGGTTTGTTTGGGAACAATGAAATCA
GCTCGAGTCACGCCCTGTGCTCACTTCTTCCATGCTGATTGCTTGCGGAAATGCTTAGCA
TCGTCAGATAGATGTCCGATATGTGTTAGGGAATATGTCTTCTGTTGA
Protein sequence:
MGMISRVRGRIRSDSFSKIHNNKSEDKLANIVWLISLVLVLPYWAPRGLLVALGGAWLMA
AYTCLVLPVLISANYRYPARWYPAVAKLVRRLARRLRAPTACLLGVLKTAYAPVDRAERL
FLQMNNLSTMVSQLLIFTACDRLLVLQGRLTCLYSLMFYNVVTYSVNYVKEICTKEDWSP
YVNVTRHSRVKHLAMSATKIVLEWTKAVTFIVTMTFILLTLGLEQGLEYFRPNTLYTLIT
GTFYLLSEKTFLELWPLALSALKLESLEGMEVLYCGVWSRAITTMIAVPLVPALVWHERF
RLALLILYICVIVHGRHRLGEELLKLNEAQGSLARFRRATAEEISTLEDVCAVCLGTMKS
ARVTPCAHFFHADCLRKCLASSDRCPICVREYVFC