| New model in OGS2.0 | DPOGS214643 |
|---|---|
| Genomic Position | scaffold207:+ 312893-313919 |
| See gene structure | |
| CDS Length | 588 |
| Paired RNAseq reads | 81 |
| Single RNAseq reads | 266 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005061 (1e-71) |
| Best Drosophila hit | Brf, isoform A (3e-56) |
| Best Human hit | transcription factor IIIB 90 kDa subunit isoform 1 (5e-52) |
| Best NR hit (blastp) | TFIIB-related factor [Bombyx mori] (1e-95) |
| Best NR hit (blastx) | TFIIB-related factor [Bombyx mori] (8e-92) |
| GeneOntology terms | GO:0006359 regulation of transcription from RNA polymerase III promoter GO:0003709 RNA polymerase III transcription factor activity GO:0000126 transcription factor TFIIIB complex GO:0008134 transcription factor binding GO:0005667 transcription factor complex GO:0005634 nucleus GO:0006352 transcription initiation GO:0008270 zinc ion binding GO:0006413 translational initiation GO:0003743 translation initiation factor activity GO:0045941 positive regulation of transcription GO:0016563 transcription activator activity |
| InterPro families | IPR000812 Transcription factor TFIIB-related IPR013763 Cyclin-related IPR011028 Cyclin-like IPR013137 Zinc finger, TFIIB-type IPR013150 Transcription factor TFIIB, cyclin-related IPR006670 Cyclin |
| Orthology group | MCL10659 |
Nucleotide sequence:
ATGTCGGGGAAAAAATGCAAACACTGTGGGTCATCAGAAATAGAAGTAGACCCTGCTAGA
GGTGATGCCGTTTGTACCAACTGTGGTTCTGTATTAGAAGATAATATTATTGTTGCTGAA
GTAGAATTCCAAGAGAATGCTCATGGTGGTGCTTCTGCAATCGGACAGTTTGTGTCAGCA
GATTCAAAAGGAGGTGCCTCGGGTTTTGGTAGAGCATTTAATGCGGGCATTGGCCAAGAG
TCAAGAGAAATAACATTGAGGAAGGCAAGAGAGGGTATCACTGCACTGTGTCAGCAGCTC
AGATTGAATCAGCAGTGTATTGACATCGCTTGTAATTTCTTTAAGATGGCACTCGCTAGG
CATCTCACTATCGGGAGGCAGTCAGCCCTAACACAAGCGGCATGCGTATATATTACTTGC
AGGACAGAGGGAACACCTCATCTTCTTATAGACATCAGTGATGCTTTGCAGATAGATTGT
TATCAACTGGGCCGTACATACTTCAAATTGTCAAAAGCACTCTGCATCAACATACCTCCA
ACTGGTAAGTGTAACTACATATTTTATGTTATCTATGCTTCATTATAG
Protein sequence:
MSGKKCKHCGSSEIEVDPARGDAVCTNCGSVLEDNIIVAEVEFQENAHGGASAIGQFVSA
DSKGGASGFGRAFNAGIGQESREITLRKAREGITALCQQLRLNQQCIDIACNFFKMALAR
HLTIGRQSALTQAACVYITCRTEGTPHLLIDISDALQIDCYQLGRTYFKLSKALCINIPP
TGKCNYIFYVIYASL