| New model in OGS2.0 | DPOGS214644 |
|---|---|
| Genomic Position | scaffold207:+ 333001-336607 |
| See gene structure | |
| CDS Length | 1377 |
| Paired RNAseq reads | 776 |
| Single RNAseq reads | 1738 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005062 (1e-95) |
| Best Drosophila hit | Brf, isoform A (3e-49) |
| Best Human hit | transcription factor IIIB 90 kDa subunit isoform 1 (1e-37) |
| Best NR hit (blastp) | TFIIB-related factor [Bombyx mori] (3e-133) |
| Best NR hit (blastx) | TFIIB-related factor [Bombyx mori] (3e-95) |
| GeneOntology terms | GO:0006359 regulation of transcription from RNA polymerase III promoter GO:0003709 RNA polymerase III transcription factor activity GO:0000126 transcription factor TFIIIB complex GO:0008134 transcription factor binding GO:0005667 transcription factor complex GO:0005634 nucleus GO:0006352 transcription initiation GO:0008270 zinc ion binding GO:0006413 translational initiation GO:0003743 translation initiation factor activity GO:0045941 positive regulation of transcription GO:0016563 transcription activator activity |
| InterPro families | IPR013763 Cyclin-related IPR011028 Cyclin-like IPR011665 Brf1-like TBP-binding IPR013150 Transcription factor TFIIB, cyclin-related IPR000812 Transcription factor TFIIB-related |
| Orthology group | MCL10659 |
Nucleotide sequence:
ATGACGGCCCTGAGACTGGTGCAGAGGATGAAGAGGGACTCCATACACTCAGGGAGGCGA
CCCTCGGGCGTCTGTGGGGCTGCACTCCTTATAGCTGCTCGACTGCACGATTTCTCACGA
ACGCCGACCGATGTGGTCCGTATCGTGAAGATTCATGAAACAACGCTTCGGAAAAGGCTC
TTGGAGTTTGGGGAGACGCCGTCCAGCGCCCTCACCTTGGACGAGTTTATGACAGTGGAC
CTCGAGGAGGAACAGGACCCACCAGCCTTCAAGATAGCCAGAAGGAGGGACAAAGATAGA
CTGCAGAAGTTAATGGAAGAGGAAGATGGCGAAAGAGAACTCACAGAGCTGCAAAGAGAA
ATAGACGCTCAGTTAGATAAAGACAAGAAAAGACGAAAGCCCACAAAGATGGTCGCGCCT
ATACTGCCTGCATCCGTTGACGACGATACGTCAGAAGACGCTGAGGCGAGTAGATTCGCA
ACAGAGGATACCTTATCACTTATAGGTGATATAGCGAGAGACGTGCAGCCGACACCCGAC
GGTGCCAATAACGACAAACTCAAGCTGGAAAAAGGACTTGGTCCAGAGATAGCCTTTATG
GGTCTGAATCCACCCGAAGAGAGGGACAAGTCGAAGCCGGAGTCCAAGCAGTTTACCAAG
GACCTGCAGGCGGATGAACTACATCTGGATGATGATGATGAACAGTACCTCGACTCGCTG
ATCATGACGGACGAAGAAGCCAGACATAAGACTCTGCTGTGGCATAACATTAACGCTGGA
TATTTGAAGGAACAAAAAATTAAAGAAGAAATACGCGCTAAAGAACGGGAAGAGGGTAAA
GACAAAAAGAAGAAAACCCGTGGATCATACAAGAAGAAGGTGGCCATTACTGGAGCGACC
GCTGGCGAGGCTGTGGGGAAGATGCTGGCGGAGAAGAAGATGAGCTCCAAGATTAATTAC
GACATATTGAAGAGCCTGGATCATCCTGGGTCGCCCAGTGTACCGCCGGTGAATGTTGTG
AAGGCTGTAGAAGAAACTAGTACAATCCAACCGCCAATACTCGAGACGGTGCCGCCGTCG
CCGGTGCCGAAGAAGCGGAAACGGAAGGAGAAGACAGCTCCCTCCCTGGCTCCTGCTACA
GTTTCTGCGAGGCCGTCACAGGGAGAACCCTCCCCGGCAGGACCCCTCCAGTCCCCCACA
GAACCCCTGCCCTCTCCTGCGGACCCCTTGCCCTCCCCTGCACCGGAAACGCCAGCACAG
AATGCTGATGATTATGAAGATGACTTTGAGGATCCGGTCGACAGCCGAGAGATGTCGCTA
GCAGCGCTCTTACAGAACGGAAACGACGACGAATATTACGACTACGAAGAATATTAA
Protein sequence:
MTALRLVQRMKRDSIHSGRRPSGVCGAALLIAARLHDFSRTPTDVVRIVKIHETTLRKRL
LEFGETPSSALTLDEFMTVDLEEEQDPPAFKIARRRDKDRLQKLMEEEDGERELTELQRE
IDAQLDKDKKRRKPTKMVAPILPASVDDDTSEDAEASRFATEDTLSLIGDIARDVQPTPD
GANNDKLKLEKGLGPEIAFMGLNPPEERDKSKPESKQFTKDLQADELHLDDDDEQYLDSL
IMTDEEARHKTLLWHNINAGYLKEQKIKEEIRAKEREEGKDKKKKTRGSYKKKVAITGAT
AGEAVGKMLAEKKMSSKINYDILKSLDHPGSPSVPPVNVVKAVEETSTIQPPILETVPPS
PVPKKRKRKEKTAPSLAPATVSARPSQGEPSPAGPLQSPTEPLPSPADPLPSPAPETPAQ
NADDYEDDFEDPVDSREMSLAALLQNGNDDEYYDYEEY