DPGLEAN09874 in OGS1.0

New model in OGS2.0DPOGS209601 
Genomic Positionscaffold44:- 309735-313413
See gene structure
CDS Length1338
Paired RNAseq reads  454
Single RNAseq reads  1089
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA009461 (8e-18)
Best Drosophila hit  TNF-receptor-associated factor 4, isoform C (1e-136)
Best Human hitTNF receptor-associated factor 4 (4e-97)
Best NR hit (blastp)  PREDICTED: similar to tnf receptor associated factor [Tribolium castaneum] (7e-177)
Best NR hit (blastx)  PREDICTED: similar to tnf receptor associated factor [Tribolium castaneum] (7e-168)
GeneOntology terms
















  
GO:0007391 dorsal closure
GO:0009790 embryo development
GO:0002168 instar larval development
GO:0008063 Toll signaling pathway
GO:0006952 defense response
GO:0007165 signal transduction
GO:0048102 autophagic cell death
GO:0035071 salivary gland cell autophagic cell death
GO:0046330 positive regulation of JNK cascade
GO:0046529 imaginal disc fusion, thorax closure
GO:0001654 eye development
GO:0043065 positive regulation of apoptosis
GO:0008270 zinc ion binding
GO:0006911 phagocytosis, engulfment
GO:0005515 protein binding
GO:0045167 asymmetric protein localization involved in cell fate determination
GO:0045179 apical cortex
GO:0005737 cytoplasm
InterPro families




  
IPR002083 MATH
IPR001293 Zinc finger, TRAF-type
IPR008974 TRAF-like
IPR012227 TNF receptor-associated factor TRAF
IPR013323 Seven In Absentia Homolog-type
IPR013322 TRAF-type
Orthology groupMCL16454

Nucleotide sequence:

ATGTACAAATGGAAACGTAATCATTCAGTAAGGAGCCCTTGCTGCGAGCGCTTGTCTCGT
CTACAATTGATAGCGCGCGAAAAACAAATCGTCGGCCATTTTGCATATTTTCTAACGATG
TGCTCCATATTCGAACGTGCGATATATCCCGATCCAGAGTCGGAGAAGGCTATAATGGGT
TCGGTGGTTTACTGCATCCACCACAAGGAAGGGTGCCAGTGGTCGGACGAGCTCCGCAAA
CTCAAGGCGCACCTGAACACCTGCAAGCACGATGCTGTGCTGTGTGCAGCTCAGTGCGGG
GCGATGATCCCGAGGGTGTTGATGCAGGACCACCTGCGTTACACCTGCCCCCGGAGACGC
GCCAACTGTGAACATTGCGGGAAGGAATTCTCCGGTAGCGCTCTGGAGGAGCACCAAGGA
AATTGCGGTCATGAGCCGGTGTACTGCGAGAACAAGTGCGGGGCCAAGGTCCAGCGGCGG
CACACCACGCAGCACGCCGCGCAGCACTGCAGCAAACGATTGGTGCCCTGCAGACACTGC
GGCCAGCGGTATACACAGGATACAGTGTCAGCTCATGGCGCGTTATGTTCCCGGGCCCCG
GTGCCGTGTCCCCAGCGGTGCGCGGCGGCCCCGGCCCGGGACGAGCTAGACGTTCACCTC
CGGGAACACTGCACGGCCACCGCCGCCGTCTGCCTCTACAGAGACGCTGGCTGTCGGTTT
AAGGGCACGAGACAGGCTCTGGAACGTCACACGGAAGAGAGTGCCCAACAACACTTAGCC
CTGGTGTCAGCGCTGGCGACGCGTCAGGCTCGGCAGCTGGATTCGCTAAGGGCGGCCGTG
GCCAGGCTCGCCGTGAACTGTAGCGGAGCCCTGGTTTGGCGCGTCACGGACTGGGCCGCC
AAGATGGCCGACGCTAAGACCAAGGACGGCGTCGAGCTCACCTCACCCGCCTTCTACACC
AGCCAGTACGGATATAAACTACAGGCGACGTTGTTCCTGAACGGTAACGGCGCAGGCGAG
GGGACGCATATTTCCGTGTACATCAAGATCCTGCCGGGCGAGTACGACGCTCTCCTGCGG
TGGCCGTTCGCCCACTCCGTGTCCTTCACGCTGTTCGACCAGAGCTCGAGCCCGGAGCGC
GCCTGCAACATCGTGGAGAGCTTCGTGCCGGACCCCACCTGGAAGAACTTCCAGCGGCCG
TCCAAGGAGCCGGACGCGCTCGGCTTCGGCTTCCCGCGCTTCGTGTCGCACGAGATGCTC
AAGAAGAGGAACTTCGTCAAGGACGACGTCATGTTCCTCAGGGTCAAGGTCGACCCCAGC
AAGATCGTCGCCGTATAG

Protein sequence:

MYKWKRNHSVRSPCCERLSRLQLIAREKQIVGHFAYFLTMCSIFERAIYPDPESEKAIMG
SVVYCIHHKEGCQWSDELRKLKAHLNTCKHDAVLCAAQCGAMIPRVLMQDHLRYTCPRRR
ANCEHCGKEFSGSALEEHQGNCGHEPVYCENKCGAKVQRRHTTQHAAQHCSKRLVPCRHC
GQRYTQDTVSAHGALCSRAPVPCPQRCAAAPARDELDVHLREHCTATAAVCLYRDAGCRF
KGTRQALERHTEESAQQHLALVSALATRQARQLDSLRAAVARLAVNCSGALVWRVTDWAA
KMADAKTKDGVELTSPAFYTSQYGYKLQATLFLNGNGAGEGTHISVYIKILPGEYDALLR
WPFAHSVSFTLFDQSSSPERACNIVESFVPDPTWKNFQRPSKEPDALGFGFPRFVSHEML
KKRNFVKDDVMFLRVKVDPSKIVAV