| New model in OGS2.0 | DPOGS200177 |
|---|---|
| Genomic Position | scaffold7395:+ 1-2992 |
| See gene structure | |
| CDS Length | 1767 |
| Paired RNAseq reads | 1910 |
| Single RNAseq reads | 5813 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002927 (1e-65) |
| Best Drosophila hit | RhoGAP19D, isoform B (7e-32) |
| Best Human hit | rho GTPase-activating protein 21 (1e-36) |
| Best NR hit (blastp) | conserved hypothetical protein [Pediculus humanus corporis] (1e-56) |
| Best NR hit (blastx) | PREDICTED: similar to Rho GTPase activating protein 21 isoform 1 [Apis mellifera] (2e-47) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0005856 cytoskeleton GO:0030659 cytoplasmic vesicle membrane GO:0005622 intracellular GO:0007165 signal transduction GO:0031410 cytoplasmic vesicle GO:0005515 protein binding GO:0005096 GTPase activator activity GO:0005794 Golgi apparatus GO:0016020 membrane GO:0000139 Golgi membrane GO:0030054 cell junction |
| InterPro families | IPR000198 Rho GTPase-activating protein domain IPR008936 Rho GTPase activation protein |
| Orthology group | MCL15820 |
Nucleotide sequence:
CAGCTGAACATTAATAACACTATTTTCTTCCACCTCAAGGCGTACGGCCTCCGCACAGTA
GGGGTGTACCGCGTGCCGGGTAACGCGGCCGGAGTGGCGGCGCTGGCTGCCGCCCTGGAC
CGCGGGGAGCCGCCCCCCGCCGACGACTCGCGCTGGGCGGACGTCCACGTGGCCTCCAGT
CTGCTCAAGGCCTACCTGAGGCGACTGCCCGATCCCATTCTCACCGCACATCTATATCCA
GCTTTTATTGCGGCTGATCGTTCCCCCGAGAGAGCTCGCGAACTGCGCAAGCTCGTCCAC
GCCCTGCCCGACGCTCACTACGAGACACTAAAGTACCTGATCCAACATTTGCGCAAAGTG
GTCGCAAACTCCGCTTATAATAAAATGGAAGCGAGAAACTTGGCCATCGTTTTCGGGCCA
ACGTTGGTGCGCGCGGCCAGCGACGACATGCTGGCGATGGTCAACGACATGTCCAGTCAG
TGTCGTATAATAGAATCCTTCTTAACACATTACGAATGGTACTTCGAAGAGGAAGAAGGC
TGTCCTCCGTCGGAGCCCCCTCCGCCGGGAGACGCCCTCACCCCCGCGCCTGCCCCCTCC
CGCGACCTGCTCATACATAACGTCAAGAAGATAGAAGCAGGCAAAGACGTGTCCACACGT
GACATAGTGTCGTCTATAATATCGGCCGCGAACCGTAAGATCCAGCGCAAGCCTCGCAAG
ACTGATAAGAAGTGGGAGGAGAAGGCTCGCTCGCCCGCGGGCTCCCCTCCCCGCTCCCCG
CTCGCCTCCCCTCCGTCGCCCTCGCCCGCACAGGCACACGCACACACGCACGTCACCACG
CTCGCACACTACGACGGTCTGCCGCACTACATGGAACAGCACCACCAAACTACCAATAAA
ATTGAAATGGAGTCAGTGACCTCGATGGGCCGCGCGAGACAGGAGATATCGCGCCACACA
CACGCCTTCAATAACTTCTCCATAGACGAAACCGGCGACCTGGTGTCTTCCTTAACGAGC
ACCTTCGACCAGAAGCTGCGCTCCCTTAACAACTCGTCCCCGCTCGACGACGGCAGCATC
CCGTACGCCGACGAGTGCCAGGAAGACGCCGACGAGGGCAAGTCGAGCGCCTCGCCCTCC
GAAGCGGGCTCCGTCCGGGGAACGTCCCCCGCGAGGCACAGAGCCGACCAGCTCAAAGCG
GCCTGGCTGAGGTCCGGCTCCTCCTCCTCCGACGAACATGACGCGCGCTGGCCACCGCCC
AGAACACTCCCACCCGGACCACCCGGCCCGCCTGGGCCCCTCGGACCGCTCGGGTCTCAC
GACGACACAGACGATTCCGAAAAAGAGAATTCCGGCCCCAAGAACGGCCCCGACGACGAC
AAAGATGTCGACACGCGGTCTCAGGCTTCCGCCGGGGACTCCCCCGACAACGATCGCAGC
GCGGCCTCCGCGGGCGAGGGTCCACGTCGCTCCGAGTCACTCGGCCGCGTGCTCCGCTCC
GAGAGCCTCAACTGCCGCAGCGACCGGCCGCAACGCTCTGAATCTCTCAGCAAGGCGGAG
CGCCCGACCAAGTTGGAGAAAGGCGAGTGGAACGTGGTGCGACGCCGCGAGGCGGGCGCC
TGGCGCTCCACCAAGCTCAAGCGGAAGAACGGTATGCCGGAGCGAGGCATCAAGCGCCGC
CACACGGTCGGCGGCACCAAGGACTTCGACAAGGACGGCTGGGCGGCGCGCCACACGCGC
ACCTCGTCCCCGGACCTGTCGTTCTAA
Protein sequence:
QLNINNTIFFHLKAYGLRTVGVYRVPGNAAGVAALAAALDRGEPPPADDSRWADVHVASS
LLKAYLRRLPDPILTAHLYPAFIAADRSPERARELRKLVHALPDAHYETLKYLIQHLRKV
VANSAYNKMEARNLAIVFGPTLVRAASDDMLAMVNDMSSQCRIIESFLTHYEWYFEEEEG
CPPSEPPPPGDALTPAPAPSRDLLIHNVKKIEAGKDVSTRDIVSSIISAANRKIQRKPRK
TDKKWEEKARSPAGSPPRSPLASPPSPSPAQAHAHTHVTTLAHYDGLPHYMEQHHQTTNK
IEMESVTSMGRARQEISRHTHAFNNFSIDETGDLVSSLTSTFDQKLRSLNNSSPLDDGSI
PYADECQEDADEGKSSASPSEAGSVRGTSPARHRADQLKAAWLRSGSSSSDEHDARWPPP
RTLPPGPPGPPGPLGPLGSHDDTDDSEKENSGPKNGPDDDKDVDTRSQASAGDSPDNDRS
AASAGEGPRRSESLGRVLRSESLNCRSDRPQRSESLSKAERPTKLEKGEWNVVRRREAGA
WRSTKLKRKNGMPERGIKRRHTVGGTKDFDKDGWAARHTRTSSPDLSF