DPGLEAN09976 in OGS1.0

New model in OGS2.0DPOGS211838 
Genomic Positionscaffold306:- 94884-97473
See gene structure
CDS Length1155
Paired RNAseq reads  1861
Single RNAseq reads  6155
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA006022 (2e-109)
Best Drosophila hit  La autoantigen-like, isoform A (9e-63)
Best Human hitlupus La protein (2e-55)
Best NR hit (blastp)  GK18125 [Drosophila willistoni] (8e-71)
Best NR hit (blastx)  RecName: Full=La protein homolog; AltName: Full=La ribonucleoprotein; AltName: Full=La autoantigen homolog (2e-72)
GeneOntology terms





  
GO:0008098 5S rRNA primary transcript binding
GO:0003718 RNA polymerase III transcription termination factor activity
GO:0005634 nucleus
GO:0003729 mRNA binding
GO:0006396 RNA processing
GO:0030529 ribonucleoprotein complex
GO:0000166 nucleotide binding
InterPro families




  
IPR000504 RNA recognition motif domain
IPR006630 RNA-binding protein Lupus La
IPR011991 Winged helix-turn-helix transcription repressor DNA-binding
IPR012677 Nucleotide-binding, alpha-beta plait
IPR014886 RNA-binding motif
IPR002344 Lupus La protein
Orthology groupMCL14695

Nucleotide sequence:

ATGACTGAAGAAAAAGAGGTACAAGCTGAAAATAACGAGAGTCAAGATAAAGAAAATAAA
AATGAGGATGAACAAAACAAAAATGCAGAAGTTGACAGTATAGAAGAAAAATCTGAATTG
GACAGTAGTATAATTCGTCAAATCGAATACTATTTTGGTGACCTTAACCTACCAAGAGAC
AAATTTCTCAGAGAGCAAGTCAAGCTTGATGATGGCTGGGTGCCACTGGAAGTGTTGACC
AGATTTAACAGACTTGCAAAACTGACGACTGACATCGGAGTTATTGCAAATGCTATCAGC
AAGTCTACATCAGGTCTTCTAGAGATATCTGATGACAATCTAAAAGTCAGACGGAATCCT
GAATTGCCGATACCTGAGATGAATGAAGAAAGACGTAAGGAGTTAGTTTCTAGAACAATC
TATGCTAAAGGATTCGGCAAAGACGCCTCCCTCGATGACATACTAAAATATTTCAAGCAG
TTTGAAGAAGTGGAAAACATTATTATGAGGAAATATCAAGATAGGAAGACAAAGACATTC
ATTTTTAAGGGTTCAGTATTCGCTACCTTCAAGACAAAAGATCAGGCAGATAAATTTATG
GAAACAAAAGATTATAAATTTAATGATACCGACCTACTGGTTATGTGGCAAGACGCATAC
GTAGAGAAAAAGAGGGAGGAATATGCAAAATTGTCAGCAAACAAAAAGAATAAAAACAAA
AATGGAGAATCCGAGCAAAAAGAGAAAAGTGAATTCAAACTGCCGACCGGAACAGTGCTT
CACTTCAGCCAGGGTCATGACAAAATGACCAGAGAGGATGTCAAAGAAGTCCTCACTCCA
TTAGGTGGGGAGGTGGCTTTTATCAGTTTTAAGGTGGGAGATACAGAGGGTTGGGTCCGT
CTGGCTAATGAGGGTGATGCTAAGAAAGTAGCCGAGAAGATTCCGGATGGTAAAATCAAG
ATCGGCGAATCTGAGGTCGTTTTCCGCGTATTAGAAGGGGAAGAAGAGAAGAATTACCTC
GATAAGACTATAGAAGAAATGTCAAAGAGACGACAGAATATGAAAAAACAGAAGAAAGGT
GGCAAACCACAGTACAGGAAAAGGAAACAAGATAATCACGACGATGCACCAAGAGCAAAA
ACAAGAGCAAGCTAA

Protein sequence:

MTEEKEVQAENNESQDKENKNEDEQNKNAEVDSIEEKSELDSSIIRQIEYYFGDLNLPRD
KFLREQVKLDDGWVPLEVLTRFNRLAKLTTDIGVIANAISKSTSGLLEISDDNLKVRRNP
ELPIPEMNEERRKELVSRTIYAKGFGKDASLDDILKYFKQFEEVENIIMRKYQDRKTKTF
IFKGSVFATFKTKDQADKFMETKDYKFNDTDLLVMWQDAYVEKKREEYAKLSANKKNKNK
NGESEQKEKSEFKLPTGTVLHFSQGHDKMTREDVKEVLTPLGGEVAFISFKVGDTEGWVR
LANEGDAKKVAEKIPDGKIKIGESEVVFRVLEGEEEKNYLDKTIEEMSKRRQNMKKQKKG
GKPQYRKRKQDNHDDAPRAKTRAS