| New model in OGS2.0 | DPOGS211802 |
|---|---|
| Genomic Position | scaffold306:+ 44630-88445 |
| See gene structure | |
| CDS Length | 2142 |
| Paired RNAseq reads | 2299 |
| Single RNAseq reads | 9646 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006128 (0.0) |
| Best Drosophila hit | CG9339, isoform C (0.0) |
| Best Human hit | TBC1 domain family member 24 isoform 1 (2e-63) |
| Best NR hit (blastp) | AGAP010235-PA [Anopheles gambiae str. PEST] (0.0) |
| Best NR hit (blastx) | AGAP010235-PA [Anopheles gambiae str. PEST] (0.0) |
| GeneOntology terms | GO:0005097 Rab GTPase activator activity GO:0005622 intracellular GO:0032313 regulation of Rab GTPase activity |
| InterPro families | IPR000195 Rab-GAP/TBC domain IPR006571 TLDc |
| Orthology group | MCL14710 |
Nucleotide sequence:
ATGCCCTCCGTGATGTTGTCTGCGGTATTAGAAGAGGAGCCCGACCTATATGAGGCATTC
CCCCCTCATGTTGATCCATCCGGAATAACAATTTTAACAGACAGCCCTCCAGTAAGAGTG
CCGGCGCGCTATCTTATATTTCGGAGGCTGGCGGTGGCTGCGGCCGGCACCTCGGCACGT
CGGCAGTCGGCAGTGCCGCAGGCGCGCGCGCATCGAAAGCATGTGCCCCGCGCCACCTTT
GCGATGTACATAGAACCGGCCGCGTTCCGCGCTCAGAGCGCCGAATCACTCGCACCGAAC
GAACAGATCCCCATATGGACGCAGTGCTTACCCTCACCCTTATTCGCAGGCAAGAAAGCG
CCTCTGAAGACCTTCGAGGAACTCCAGCCGCTCCTCCAGCAGGGCCGCAAACGGGATCTC
AAACTGCTCATCAGAGAGAACTCCTGGCCTATCAACAGCCCCATACGAGCGTCTCTCTGG
CCGGCACTCTGCCGTCAGCATCAACATGGAAAATCTATGCTCGATGGTTTCTATTGGGAC
ATGGTTACACAGGTATTCGGGACAGTGGAGCTGCCGGACAAACCGATCATGCTGCCACCG
TTCGTGGAGGCGACCCACTGTCTGGGTTACCATCTGACTCGCAAGGGTCGCGCGGTCGCG
GACAGGGTGGTCTCTGTCCTGGGATACGCCTGCCCGGACATCACATACAGCCCCAGCCTC
TATCCCATCACTGCTGCACTACTGCACTTCATGCCTGAGGAGGAATGCTACCACTGTATG
GCCAGTCTGGTGGCGTCCAAGGAAAAGATGTTCATAACACAGACAAAACTACTCAACGAA
GTCACATGGAAGACTGTTATGCAGATCGCTAAAAAACATGCCAAGTCGGCCGCCCAGCAT
CTGTCTCGATTGTCTGGTACCATCGGCCCGGAGCGCATCTACGCTGATTGGCAGTGGTGG
ATATTGGCAGCGCTGCCATTCCCACATCTTGTTAGAGTGCTCGACTGCTTCTTCCACGAG
GGGATGAAGGTATTCTACAGGGTAGCCCTCGCGATACTCATCCTGTTCCAAAAGCACTCC
AGCAACCAGAGCTCGGAGTGGTACGCGGAGGCCACCAAGAACGGGGTCGACCACGCCGTG
GACAAGTTCTGTAGGAACATGCCCGCCTCGCCAACCAAACTATTAAGAACCGCCTTTAGT
ATAAGGGCCTTGAGCTCCCAGTACATATCCAGGGTGTTCATAAAGACGGAGATGACACTC
AAGTCGAAGCAGGTGATATCTGGTCTGAGGCTTGTGCGTTCCCGTTCGTCCGATAACTTG
CCGACGAGCCAGTCACAAGTCAACATACAGATGATGTCACACACGCTCACCATACGAGAG
AGCCCGCGCTCTTCCCACCTGGCCCTGTGGTTCCCATTCCCTAACGCGGTGTTCAGCGAA
CGCCAACACACTTCGGACCTCCGGCAGAAGTTATTCACGTTGTGGTCGTGGCTTCCGATA
CGTATCACCATGTATCAGCCTGTGCTGCTCTACACCACCGAGGAGCACGGCTGTTCATTG
ACAACATTCTACGTCAGAGTGGAACACCATGAGCCAACGTTACTCATGATTAAGACTTGT
AATAATGAGGTATTTGGAGCGTATTGTTCGACGCGGTGGTTCGAACGGAACCAAAAAGAC
GAACGTGGTAACAGACAAGCGTACTTCGGCACTGGAGAGACATTCCTCTTCAGCCTTTAC
CCGGAGCGCGCCAAATATCCGTGGGTGGGGTGCTCTATGGGGCTGGAGGGGAAGGGGGAG
GAGAGGGTTTCCCACGGCTCGGAGTTGTTCATGGCGGCTGACTCCAAGATGATCACCATA
GGAGGCGGCCTGCACCCAGTGCGAGCCAAGTACCCGTGGGTCGGGTGCACGGACAAGAAG
GACGACGGGGAGAATAAGACAACGCACGCCAACTCACTCTTCATGGCCGCTGATAATACC
ATGATCACTATCGGCGGAGGTGACGGTCAGGCCATTTGGATGGACGAGAACATCCGCTTC
GGTAAGACGGACCGCTGCTCCACCTTCAACAACCCGCCGCTCTGCCCGGCCGGCGACTTC
GAGATCCGCGTGCTCGAGGTGTACGGCTTCTCCGGCGCATAA
Protein sequence:
MPSVMLSAVLEEEPDLYEAFPPHVDPSGITILTDSPPVRVPARYLIFRRLAVAAAGTSAR
RQSAVPQARAHRKHVPRATFAMYIEPAAFRAQSAESLAPNEQIPIWTQCLPSPLFAGKKA
PLKTFEELQPLLQQGRKRDLKLLIRENSWPINSPIRASLWPALCRQHQHGKSMLDGFYWD
MVTQVFGTVELPDKPIMLPPFVEATHCLGYHLTRKGRAVADRVVSVLGYACPDITYSPSL
YPITAALLHFMPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQH
LSRLSGTIGPERIYADWQWWILAALPFPHLVRVLDCFFHEGMKVFYRVALAILILFQKHS
SNQSSEWYAEATKNGVDHAVDKFCRNMPASPTKLLRTAFSIRALSSQYISRVFIKTEMTL
KSKQVISGLRLVRSRSSDNLPTSQSQVNIQMMSHTLTIRESPRSSHLALWFPFPNAVFSE
RQHTSDLRQKLFTLWSWLPIRITMYQPVLLYTTEEHGCSLTTFYVRVEHHEPTLLMIKTC
NNEVFGAYCSTRWFERNQKDERGNRQAYFGTGETFLFSLYPERAKYPWVGCSMGLEGKGE
ERVSHGSELFMAADSKMITIGGGLHPVRAKYPWVGCTDKKDDGENKTTHANSLFMAADNT
MITIGGGDGQAIWMDENIRFGKTDRCSTFNNPPLCPAGDFEIRVLEVYGFSGA