| New model in OGS2.0 | DPOGS211547 |
|---|---|
| Genomic Position | scaffold3955:- 7006-12515 |
| See gene structure | |
| CDS Length | 1440 |
| Paired RNAseq reads | 688 |
| Single RNAseq reads | 1677 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009492 (9e-48) |
| Best Drosophila hit | small optic lobes, isoform E (2e-175) |
| Best Human hit | calpain-15 (8e-120) |
| Best NR hit (blastp) | PREDICTED: similar to small optic lobes protein [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to small optic lobes CG1391-PB, isoform B [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0007399 nervous system development GO:0007632 visual behavior GO:0004198 calcium-dependent cysteine-type endopeptidase activity GO:0008270 zinc ion binding GO:0006508 proteolysis GO:0005622 intracellular GO:0005737 cytoplasm |
| InterPro families | IPR001300 Peptidase C2, calpain, catalytic domain IPR022684 Peptidase C2, calpain family |
| Orthology group | MCL12908 |
Nucleotide sequence:
ATGCTGCCCTGCAACAGGAAGGGACACCTCGTGTACTCGCAGGCTAAGAGGAAACAGCTT
TGGGTGCCGTTGATAGAAAAAGCTGTTGCTAAACTCCACGGCTGCTACGAGGCGCTGGTC
TCCGGGCGAGCTATAGAGGGTCTGTGTACGTTGACTGGAGCCCCGTGCGAGTCCGTGTCC
CTGCAGGCGGGGGGGGGCGCGCCTCTGGAACAGCTGGACAGGGACCTGGTGTGGGCCCAG
CTGTTGTCGTCACGACAAGCCTGCTTCCTTATGGGGGCCAGCTGTGGAGGAGGGAATATG
AAGGTGGATGAAGAGGAGTACCAGCGTCTGGGTCTCCGTCCTCGTCACGCGTACTCGGTG
CTGGACGTGGTGGAGGTGGCGGGGTACAGTCCGCCGCTCAGGTTGCTGCGGCTGCGGAAC
CCCTGGGGCCACTACACCTGGAGGGGCGCCTGGGCCGCCAACTGTCCGCGGTGGACCGAC
CAGCTGAGGAGAGCCCTGCCGGCTAACAACGCCGATAGAGATCAAGGGGTCTTCTGGATC
AGTTTCGACGACGTCCTCAAATACTTCGACTGTATAGACATCTGTAAGGTCCGCGTGGGG
TGGCACGAGGTCCGGCTGGCGGGCATCCTGCCGCCGCTGTCCTCCACCCGCCACCTCACC
TGCCTGCTGCTCACCGCCGCACAGCCCACGGAGGTCGACTTCACACTCTTCCAGGAAGGT
CAGAGGAACTCCGCTAAGAGCCAGCGTTCTCAGTTGGACCTGTGCGTGGTCGTGTTCCGG
ACCAAGTCGGGGTCCAACGCGCAGGTCGGCAAGCTGGTCGCTCACAGCAAGAGACAGGTG
CGCGGCTTCGTCGGTTGCCACAAGATGCTGGAGAAGGGTTTCTACCTGGTCGTGTGTCTG
GCCTTCAACCACTGGCACACCGGCCTGGAGGCGGAGCGAGCTCTGTGGCCTCGGCACGTG
TTGGTCGCTCACTCGTCCAAGCCGCTGGGAGTGTCCCGCCCGAGCCTCCACCCTCACCTC
CTGGCCGACGCGATCATAGGACTCACCCTGGCCAGGGGACAGCGACACGAGGGCCGGCAG
GGGATGACGGCGTACTACCTCACTAAGGGCTGGGCGGGGCTGGTCGTGATGGTGGAGAAC
AGACACACAGACAAGTGGATCCACGTGAAGTGTGACTGTCAAGAGAGTTACAACGTAGTG
TCGACACGCGGGGAACTCAAGACGATAGACTCCGTCCCTCCTCTGCACAGGCAAGTGATC
ATAGTCCTGACGCAGTTGGAGGGTAGTGGGGGGTTTTCTATCGCGCACCGCCTCACTCAC
CGCCTGGCCGCCGCCGCGCGCCTTCACGACTGGGCCCCGCGACCGGACGACGCCCCGCGA
CACAGACCGCCACTCGCACGGAGACTAAGCGGACTGCACGCGCCTAGACTCATCACATAG
Protein sequence:
MLPCNRKGHLVYSQAKRKQLWVPLIEKAVAKLHGCYEALVSGRAIEGLCTLTGAPCESVS
LQAGGGAPLEQLDRDLVWAQLLSSRQACFLMGASCGGGNMKVDEEEYQRLGLRPRHAYSV
LDVVEVAGYSPPLRLLRLRNPWGHYTWRGAWAANCPRWTDQLRRALPANNADRDQGVFWI
SFDDVLKYFDCIDICKVRVGWHEVRLAGILPPLSSTRHLTCLLLTAAQPTEVDFTLFQEG
QRNSAKSQRSQLDLCVVVFRTKSGSNAQVGKLVAHSKRQVRGFVGCHKMLEKGFYLVVCL
AFNHWHTGLEAERALWPRHVLVAHSSKPLGVSRPSLHPHLLADAIIGLTLARGQRHEGRQ
GMTAYYLTKGWAGLVVMVENRHTDKWIHVKCDCQESYNVVSTRGELKTIDSVPPLHRQVI
IVLTQLEGSGGFSIAHRLTHRLAAAARLHDWAPRPDDAPRHRPPLARRLSGLHAPRLIT